A0A2P5FT50 | AlphaKnot 2.0

AF4

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Information

Protein name	Amino acid/polyamine transporter
Main knot	4₁ (54%)
Global pLDDT	79.92
Species	Charcoal tree
UniProt	A0A2P5FT50
Structure Prediction Model	AlphaFold v4: A0A2P5FT50
PDB structures	-
Model length	292
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					82.2	35-267	233	1-34, 268-292	34	25

Model Sequence

MDSQELHEMSARSQNQMKRTLNWWDLIWFGIGSVMGAGIFVLTGDAARNHTSLVVVLTYFISGLSALLSVLFYTEFSVELPVARGTFAYLRVELSDFVAYIAAGNILFEYMVSGASVARSWTSYFDTLCNHNPNDFRVKVSSLPEDYSHIDPIAIVVSVAVCIGASLSIKGSSRFNSFAAIVHMLVLVFILIAGLTKADPTNMTPFSPYGVPGILKASALLFFAYVGFDGVATLGEELKNPVRDIPIGLIGSMLITIASYCLLIATLSLMQPYNQIDTDAPFTVAFQAVGMD

Comments

ESM1

Categories voted by users:

Information

Protein name	Amino acid/polyamine transporter
Main knot	4₁ (53%)
Global pLDDT	91.16
Species	Charcoal tree
UniProt	A0A2P5FT50
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	292
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					87.2	35-267	233	1-34, 268-292	34	25

Model Sequence

Comments

Domain	Eukaryota
Family	Cannabaceae
Species (Full Name)	Trema orientale (Charcoal tree) (Celtis orientalis)
Gene	TorRG33x02_031370
PFAM codes	PF13520
InterPro codes	IPR002293
PDB structures (whole Protein)	-

A0A2P5FT50F1

AF4

Model Sequence

ESM1

Model Sequence