A0A2S6HVZ2 | AlphaKnot 2.0

AF6

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Information

Protein name	Type I restriction endonuclease subunit R
Main knot	8₃ (49%)
Global pLDDT	87.9
Species	Hungatella xylanolytica
UniProt	A0A2S6HVZ2
Structure Prediction Model	AlphaFold v6: A0A2S6HVZ2
PDB structures	-
Model length	445
AlphaFold deposition date	2026-06-01
AlphaKnot deposition date	2026-07-09

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					87.71	65-398	334	1-64, 399-445	64	47		Knot

Model Sequence

METRLMKKQMTAAYQYSYVRLVLNYYTILETVADEAPQTQQMTDYLKRLNSLIGECISGKEVNKDLLALRKDMTHEVEVLTSYADCFQIFEYILNRMERKFISSGKTNDGDEAFIKRLMGFITDTSDSAVMNGRIKQIIGQLPIRLTKQKFYSLLMEGLSVYLGSPRENLRDMMYTLRTESMVSLPEGMDAGHKDIYEILQQFKRMDYRDMTFDSFEEASAKLSYASQVLTDESGFYVMLQDVINDLCVLMFAKQDAVIDINEEEFYRSVISSIQVKLDQEDFTVGEDEFLDQLTQLEGRQETYYERYLKVEVLKENEESADDGDYIRSMNVDRLLSGSSFAELIKEEGRETLSGEESAIVDKSYLNQQAQAYIQELEELFADAPKPVVRAVMAKVLSDLPVYFNSIDEIQEYVRGSFSSCLDRAEKETCMELLEELMDYENKLV

Comments

AF4

Categories voted by users:

Information

Protein name	Type I restriction endonuclease subunit R
Main knot	8₃ (46%)
Global pLDDT	88.19
Species	Hungatella xylanolytica
UniProt	A0A2S6HVZ2
Structure Prediction Model	AlphaFold v4: A0A2S6HVZ2
PDB structures	-
Model length	445
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					88.2	29-434	406	1-28, 435-445	28	11

Model Sequence

Comments

Domain	Bacteria
Family	Clostridiaceae
Species (Full Name)	Hungatella xylanolytica
Gene	BXY41_103339
PDB structures (whole Protein)	-

A0A2S6HVZ2F1

AF6

Model Sequence

AF4

Model Sequence