A0A2U2ZDD2 | AlphaKnot 2.0

AF4

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Information

Protein name	Integral membrane protein
Main knot	5₂ (55%)
Global pLDDT	83.29
Species	Streptomyces sp
UniProt	A0A2U2ZDD2
Structure Prediction Model	AlphaFold v4: A0A2U2ZDD2
PDB structures	-
Model length	352
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.2	23-279	257	1-22, 280-352	22	73

Model Sequence

MTDTTVRIDGNTLRLPGGTAVRFIRTLRLPETGTHALPPGLGEFPVRRVADYAESVPEAWRARGGVMLPVYLREAMWLSFAGTKEPAALQVGVGKVCAVSGRPWSDRPARDPQNYLVLPRQPWLDGINSGKGTVRQFVAVPLGLGATVEGQVTGEEVWGGVQLQSFPLNPEALARWREEERERERLRAERARFSAHTAGFGAAPAMAAPPAPGAAPAASGGAPRAAAAMGLGVGGSMRQEVYQDDRPLSDWSERPAGRVFVHLVTPPQWRSITGEAPPPSPVDRAAYTRAGLPWFDYYDQDARDLEPTDTLRSVKPVGDWLGDDHEPWQPPSPHQVKPLGDAQGEPVEDGDW

Comments

ESM1

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (64%)
Global pLDDT	75.3
Species	Streptomyces sp
UniProt	A0A2U2ZDD2
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	352
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					86.5	23-279	257	1-22, 280-352	22	73

Model Sequence

Comments

Domain	Bacteria
Family	Streptomycetaceae
Species (Full Name)	Streptomyces sp. NWU339
Gene	DIZ27_13840
PDB structures (whole Protein)	-

A0A2U2ZDD2F1

AF4

Model Sequence

ESM1

Model Sequence