A0A2U3KF16F1

PAS domain S-box
AF4
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Information
Protein name
PAS domain S-box
Main knot
Unknown (87%)
Global pLDDT
71.05
Species
Syntrophobacter sp
UniProt
Structure Prediction Model
AlphaFold v4:  A0A2U3KF16
PDB structures
-
Model length
1040
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
72.2 45-850 806 1-44, 851-1040 44 190
Model Sequence
MSVETIDNEQTRVALLASIVDSSDDAIIGKTLEGVTTSWNRAAESMYGYSAEEIIGKPVSVLLPNDRQDEMDELLAKIRLGHRVDHYETVRVRKDGSLINISLSVSPIHNTSGKLIGASSIARDISERKRIDEQMQATSTYARSLIEASLDPLVTISPEGKITDVNEATVKVTGNPREKLIGTDFSDYFTEPKNAREGYRQVFSQGFVTDYPLTIRHEDGRLTDVLYNASLYRDAQGNVLGVFASARDVTAQRQAAQYARSLIEASLDPLVTISPEGKITDVNEATVRVTGIDRDRLVGTDFSDYFTDKNKAREGYQQVFQQGFVTDYPLTIRHKDGKLIEVLYNASVYRDVQDNVLGVFAAARDVTAQRQGTQYARSLIEASLDPLVTISPEGKITDVNEATVRVTGIDRDKLVGTDFSDYFIEPDKAREGYQQVFQKGFVTDYPLTIRHKDGSLVEVLYNASVYKDVTGKVLGVFAAARDVTVQRQTSQYARSLIEASLDPLVTISQEGKITDVNEATIRVTGVPREGLVGADFSDYFTEPEKAREGYRQVFEKGFVTDYPLTIRHRDGKLVDVLYNASVYKDTRGNVLGVFAAARDVTESKRVMRQFEETKTFLDNILESSTKYSIIGKDLNHKILSWNEGARRNYGYTGEQIIGTDSSILHSPEDIASGTVDRMLETAYEKGLAEGEFERVRKDGSRFQASVVVTRRNDTSGNPIGFLLMSNDISEKKQAEEQLRQASQYARSLIEASLDPLVTISPEGRITDVNEATAKVTGNNRDGLVGTDFSDYFTEPDKAREGYQQVFQQGFVTDYPLTIRHKDGKLIEVLYNASVYRDMHGNVLGVFAAARDVTAQRQAAQYARSLIEASLDPLVTISPEGKITDVNEATIKVTGVSRDRLIGTDFSDYFTEPENARKGYEQVLSKGFVTDYPLTVRHRYGRLTDVLYNASVYRDVQSNVLGVFAAARDVTAQKKAEANIAEQRAREEGRARELDRLAELERFQKLTIGRELKMIELKKEIEELRKANETLLKEPAGRAYP
Comments
Domain Bacteria
Family Syntrophobacteraceae
Species (Full Name) Syntrophobacter sp. SbD1
Gene SBDP1_190038
PFAM codes  PF00989,  PF13426
InterPro codes  IPR000014,  IPR000700,  IPR001610,  IPR013767,  IPR035965
PDB structures (whole Protein) -