| Protein name |
Virginiamycin B lyase (Modular protein) (EC 4.2.99.-)
|
| Main knot |
Unknown (70%)
|
| Global pLDDT |
74.69
|
| Species |
Candidatus Sulfopaludibacter sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A2U3LXH5
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 A0A2U3LXH5: L0
|
| Model length |
932
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
74.7 | 99-721 | 623 | 1-98, 722-932 | 98 | 211 |
|
Model Sequence |
MSLDRLEGACLMANIQSISRRICLAGIALFCSTVLWGQSISITEFSVTTAGSKPANIAVAPNGDIAFTESNSNKIGRISTAGKFTEAPVLTQNSQPYGIALGPYDEALWFTESNANKIGRLLPDGTINEYPIPTANSGPYLITGGPDGALYFTELTANQIGRIVASGSNIGKVTEFPIPTANSQPSGIAMGPDGALWFTEAAANKIGRVTTTGTFAEVATPTANSQPTGITLGPDGEMWFTEFSGNKVGKITTGLFKLITEFPVPTSVSQPNGITLGPDGALWFLESNGNKLGRVTPLGTVTESAIPSGASQPAAIILGPDGALWYADQNSNKIGRAKPAPTITEIPVPTAASKPDSITAGPDGNVWFTELANVGRINLAGKITEFPIPTANSLPAGIVSGPDGNLWFAESAGNNIAQVTPAGAVTEFPVTTANSYPGSLAVGADGALWFTEANGNNIGRITTVGAVTEFPLLTAKSLPGGIAAGPDGALWFVEINGNNIGRITTAGHVTEFPLPTGYTAPFGIASAPDGALWFTNSHAIGRITTSGTVTEYPLPNGIKAIYIVVGQDGALWFTDGNSGTLGRITTAGLIDDFLTPTSTSQPFGIASGPDGAIWFTEETAGQIGRAALPLFRKSVVPASGATATQTFVMRFYDPDGTSDLNVLDVLINNFLNGQGACYLAYQLSSNTLFLVDDRGDAGGPFAGGMVLNGSSGQIQNSQCQVNGSGSSATVSGNVLLLTLNITFQPSFSGNKIVHLAQVNQAQYTAGWGRQGVWQVPGAAAAQITFQGASPARGVSTGGITQPITLNVTDTLSTTNLGIVNLLINDFIDGRNACYVAYSVGSNTLYLVDDSGDAGGPFAGSMILNGSGLIENAQCQVIGAGTSATQNGNLLTLTLNLLFKEGFVGNHVFYGAARDTASANNTDWQASGTWSVQ
|
| Domain |
Bacteria
|
| Family |
Solibacteraceae
|
| Species (Full Name) |
Candidatus Sulfopaludibacter sp. SbA4
|
| Gene |
SBA4_900010
|
| InterPro codes |
 IPR015943
|
| PDB structures (whole Protein) |
-
|
A0A2U3LXH5