| Protein name |
CMD domain-containing protein
|
| Main knot |
61 (77%)
|
| Global pLDDT |
89.97
|
| Species |
Acidobacteria bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A2V9YEH2
|
| PDB structures |
-
|
| Model length |
300
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
92.8 | 60-268 | 209 | 1-59, 269-300 | 59 | 32 |
|
Model Sequence |
MPAKGKLTLVRESEASGRTSQVFAEVKAALGMPYVSLLYKAYAAYPKFLDLHWQAFKPVVETQEFFDLAGRLRAEAYTRMHNYFRLPDLCAQLTEESFSPGAQHELTRLIETLHASNAPLLLLAAAALQAFDKPIGRERKTHPAQAPSMFAMPIAAEEERAPASTRKIYEEMKRGMELPVLNLDYRAMGRWPDFLRDYWQVLRPISESPVYRESCQGLRESGAALAEEIPVQVSLTVAQLQDAGMKDEDVAAVVRITEMFTKSLARLVMNIALAKIGLEGGSSADSVRTPQTLAPPMRVA
|
| Protein name |
CMD domain-containing protein
|
| Main knot |
61 (62%)
|
| Global pLDDT |
90.94
|
| Species |
Acidobacteria bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
300
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
94.9 | 62-271 | 210 | 1-61, 272-300 | 61 | 29 |
|
Model Sequence |
MPAKGKLTLVRESEASGRTSQVFAEVKAALGMPYVSLLYKAYAAYPKFLDLHWQAFKPVVETQEFFDLAGRLRAEAYTRMHNYFRLPDLCAQLTEESFSPGAQHELTRLIETLHASNAPLLLLAAAALQAFDKPIGRERKTHPAQAPSMFAMPIAAEEERAPASTRKIYEEMKRGMELPVLNLDYRAMGRWPDFLRDYWQVLRPISESPVYRESCQGLRESGAALAEEIPVQVSLTVAQLQDAGMKDEDVAAVVRITEMFTKSLARLVMNIALAKIGLEGGSSADSVRTPQTLAPPMRVA
|
A0A2V9YEH2
IPR019714