| Protein name |
Transposase
|
| Main knot |
81 (50%)
|
| Global pLDDT |
89.8
|
| Species |
Paenibacillus illinoisensis
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A2W0CFM7
|
| PDB structures |
-
|
| Model length |
265
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
91.0 | 17-238 | 222 | 1-16, 239-265 | 16 | 27 |
|
Model Sequence |
MENSQYSKMVKLKKCMDLLRVSIGEDQIKRGLRRMEWTELGIVGSFNSMNVYEKHNMELMECFDNHGVIGQVMNIKWRELLSHEQVLISGLCKPKEPYIRFTPKRNRNESAYDFDGYQLKLVNQSIHSQLIEWKSNKWLYNRLFDSWVIIRKRALQGLLEQKKRKEILPVGSISLIQSDPEISSLHVQKYLGNEPLISRGGVDMSKVKEYAARGFFSLPEIQQIQKISDVRSAYTLMELTRERRLATQINQKQFLYARLSRESQI
|
| Protein name |
Transposase
|
| Main knot |
81 (53%)
|
| Global pLDDT |
88.44
|
| Species |
Paenibacillus illinoisensis
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
265
|
| ESM generation time |
2023-06-23: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
89.7 | 19-234 | 216 | 1-18, 235-265 | 18 | 31 |
|
Model Sequence |
MENSQYSKMVKLKKCMDLLRVSIGEDQIKRGLRRMEWTELGIVGSFNSMNVYEKHNMELMECFDNHGVIGQVMNIKWRELLSHEQVLISGLCKPKEPYIRFTPKRNRNESAYDFDGYQLKLVNQSIHSQLIEWKSNKWLYNRLFDSWVIIRKRALQGLLEQKKRKEILPVGSISLIQSDPEISSLHVQKYLGNEPLISRGGVDMSKVKEYAARGFFSLPEIQQIQKISDVRSAYTLMELTRERRLATQINQKQFLYARLSRESQI
|
| Domain |
Bacteria
|
| Family |
Paenibacillaceae
|
| Species (Full Name) |
Paenibacillus illinoisensis
|
| Gene |
PIL02S_04639
|
| PDB structures (whole Protein) |
-
|
A0A2W0CFM7