| Protein name |
Uracil permease
|
| Main knot |
31 (57%)
|
| Global pLDDT |
83.87
|
| Species |
Pseudomonas jessenii
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A2W0ERR9
|
| PDB structures |
-
|
| Model length |
397
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
89.4 | 4-152 | 149 | 1-3, 153-397 | 3 | 245 |
|
Model Sequence |
FQSVLGAVIAASLIGLLITPVFSRITKFFPPLVTGIVITTIGLTLMPVAARWAMGGNSHAPDFGSMANIGLAAVTLVLVLLLSKIGSATISRLSILLAMVVGTVIAVFLGMADFSSVTQGPMFGFPTPFHFGMPTFHFAAILSMCIVVMVTLVETSADILAVGEIIGTKVDSKRLGNGLRADMLSSMFAPIFGSFTQSAFAQNVGLVAVTGIKSRYVVATGGAFLVLLGLLPFMGRVIAAVPTSVLGGAGIVLFGTVAASGIRTLSKVDYRNNVNLIIVATSIGFGMIPIAAPNFYDHFPSWFATIFHSGISSSAIMAIVLNLTFNHLTAGNSDQQSVFAAGTERVLRYQDLAALREGDYFSEGKLHDCDGKEIPVVEADHGHGEPRAVHAKNSEHV
|
| Protein name |
Uracil permease
|
| Main knot |
31 (53%)
|
| Global pLDDT |
87.45
|
| Species |
Pseudomonas jessenii
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
397
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
95.2 | 4-154 | 151 | 1-3, 155-397 | 3 | 243 |
|
Model Sequence |
FQSVLGAVIAASLIGLLITPVFSRITKFFPPLVTGIVITTIGLTLMPVAARWAMGGNSHAPDFGSMANIGLAAVTLVLVLLLSKIGSATISRLSILLAMVVGTVIAVFLGMADFSSVTQGPMFGFPTPFHFGMPTFHFAAILSMCIVVMVTLVETSADILAVGEIIGTKVDSKRLGNGLRADMLSSMFAPIFGSFTQSAFAQNVGLVAVTGIKSRYVVATGGAFLVLLGLLPFMGRVIAAVPTSVLGGAGIVLFGTVAASGIRTLSKVDYRNNVNLIIVATSIGFGMIPIAAPNFYDHFPSWFATIFHSGISSSAIMAIVLNLTFNHLTAGNSDQQSVFAAGTERVLRYQDLAALREGDYFSEGKLHDCDGKEIPVVEADHGHGEPRAVHAKNSEHV
|
A0A2W0ERR9
IPR006042