A0A2W4KIW4 | AlphaKnot 2.0

AF4

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Information

Protein name	Amino acid permease
Main knot	4₁ (55%)
Global pLDDT	85.77
Species	Thermocrispum agreste
UniProt	A0A2W4KIW4
Structure Prediction Model	AlphaFold v4: A0A2W4KIW4
PDB structures	-
Model length	305
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					87.9	42-292	251	1-41, 293-305	41	13

Model Sequence

MTSAFRRTISVSAVLDRGKSKDGLRKRLGAKDMIGFGVGIIIGTGIFTLAGVEAKQHAGPAVTLSFVIGAVVAALAAICYAEMASSVPTAGSAYTYAFATLGEGFAWIIGWDLLLEFSLGAAVVSRGWSGYLADLFGLPPELFGEEAVVNVGAVLILAILTVVAVVGIKMSALFTNALVVVKLIVCVLVIGIGAFFVTAANWRPFVPESRQAEAPDVLKQPIIEAGLGIEPTMYGTIGLLTAAAVVFFAYTGFEALANLGEEVRRPQRDLTIGLLGALSICAVLYVGVSLVLTGMVPYAEIDSGA

Comments

ESM1

Categories voted by users:

Information

Protein name	Amino acid permease
Main knot	4₁ (61%)
Global pLDDT	88.97
Species	Thermocrispum agreste
UniProt	A0A2W4KIW4
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	305
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.1	42-292	251	1-41, 293-305	41	13

Model Sequence

Comments

Domain	Bacteria
Family	Pseudonocardiaceae
Species (Full Name)	Thermocrispum agreste
Gene	DIU77_20455
PFAM codes	PF13520
InterPro codes	IPR002293
PDB structures (whole Protein)	-

A0A2W4KIW4F1

AF4

Model Sequence

ESM1

Model Sequence