| Protein name |
RepB domain-containing protein
|
| Main knot |
61 (64%)
|
| Global pLDDT |
91.16
|
| Species |
Chloroflexi bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v6:
A0A2W6BQA8
|
| PDB structures |
-
|
| Model length |
295
|
| AlphaFold deposition date |
2026-06-01
|
| AlphaKnot deposition date |
2026-07-09
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
93.04 | 63-276 | 214 | 1-62, 277-295 | 62 | 19 |
|
Knot |
Model Sequence |
MADSAAHPGAEILEDHAEGRIKTLYDDIKATLRVPVVNLVFRVLAAQYPDYLQVAWRTLQPNAQTAFFEMSSDELRRRAVAGVAEFEPAPPRTLGAEVTDIVRVFHYVNPKLLLAVGALRAALNGQEPRLQELSRDEKRQIERGVPVGAPTTRQVDLEEADDRVRGIFDDIRLTLGLSVINSDYRALASRPDDLETLWSSLKPHVDSPRYGQIVRELRSMTRAHVSVLPFRMDLNPHTLRHSGLSEQQLDGLRTTLSEFYGLLPGLVVNTAFFAVATLGRDEALRSPYPLAVPAR
|
| Protein name |
RepB domain-containing protein
|
| Main knot |
61 (63%)
|
| Global pLDDT |
91.52
|
| Species |
Chloroflexi bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
A0A2W6BQA8
|
| PDB structures |
-
|
| Model length |
295
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
92.9 | 63-269 | 207 | 1-62, 270-295 | 62 | 26 |
|
Model Sequence |
MADSAAHPGAEILEDHAEGRIKTLYDDIKATLRVPVVNLVFRVLAAQYPDYLQVAWRTLQPNAQTAFFEMSSDELRRRAVAGVAEFEPAPPRTLGAEVTDIVRVFHYVNPKLLLAVGALRAALNGQEPRLQELSRDEKRQIERGVPVGAPTTRQVDLEEADDRVRGIFDDIRLTLGLSVINSDYRALASRPDDLETLWSSLKPHVDSPRYGQIVRELRSMTRAHVSVLPFRMDLNPHTLRHSGLSEQQLDGLRTTLSEFYGLLPGLVVNTAFFAVATLGRDEALRSPYPLAVPAR
|
| Protein name |
RepB domain-containing protein
|
| Main knot |
61 (59%)
|
| Global pLDDT |
89.35
|
| Species |
Chloroflexi bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
295
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
92.1 | 62-269 | 208 | 1-61, 270-295 | 61 | 26 |
|
Model Sequence |
MADSAAHPGAEILEDHAEGRIKTLYDDIKATLRVPVVNLVFRVLAAQYPDYLQVAWRTLQPNAQTAFFEMSSDELRRRAVAGVAEFEPAPPRTLGAEVTDIVRVFHYVNPKLLLAVGALRAALNGQEPRLQELSRDEKRQIERGVPVGAPTTRQVDLEEADDRVRGIFDDIRLTLGLSVINSDYRALASRPDDLETLWSSLKPHVDSPRYGQIVRELRSMTRAHVSVLPFRMDLNPHTLRHSGLSEQQLDGLRTTLSEFYGLLPGLVVNTAFFAVATLGRDEALRSPYPLAVPAR
|