A0A2Z6AUR9 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	SLBB domain-containing protein
Main knot	3₁ (63%)
Global pLDDT	78.55
Species	Desulfovibrio ferrophilus
UniProt	A0A2Z6AUR9
Structure Prediction Model	AlphaFold v4: A0A2Z6AUR9
PDB structures	-
Model length	370
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					95.5	268-368	101	1-267, 369-370	267	2

Model Sequence

MHHPTRSHNSTAALMLLALFAAFLGMNHSVPPAYATTSAAAQEASVEYVAGVGFIDWEDAKAVASGTGAPPANAANLAQARAAARRAAVLDARRNLMEVVGQVRIDSQTTVRNLLVQNDLVTSRVQGILAHSTIVAEQMLADGSVRVTVSVPLTGELAREILDRGSPTAPAGVNRTSPLEERVRILEARVAALTNALETFSNDSGTSPATGNDPLDMQTRRKFSELDTRLRQLENRGSQQPPAAAQQRSSAPSLPPAVRAEARATTGLIIDARGTDFKPTLRPNIVSGDRLLYPADSVDFKKGIGQGFVRYYRELAQAQQSQRAGAAPKIIRAQAVDGKLQIPPADADFLQNVLAESGNFLDRCQVVVVF

Comments

ESM1

Categories voted by users:

Information

Protein name	SLBB domain-containing protein
Main knot	3₁ (64%)
Global pLDDT	83.57
Species	Desulfovibrio ferrophilus
UniProt	A0A2Z6AUR9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	370
ESM generation time	2023-06-27: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					75.8	268-368	101	1-267, 369-370	267	2

Model Sequence

Comments

Domain	Bacteria
Family	Desulfovibrionaceae
Species (Full Name)	Desulfovibrio ferrophilus
Gene	DFE_0242
PDB structures (whole Protein)	-

A0A2Z6AUR9F1

AF4

Model Sequence

ESM1

Model Sequence