A0A316Q4D1 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Nitrate reductase
Main knot	4₁ (62%)
Global pLDDT	90.96
Species	Clostridiales bacterium
UniProt	A0A316Q4D1
Structure Prediction Model	AlphaFold v4: A0A316Q4D1
PDB structures	-
Model length	317
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.9	60-310	251	1-59, 311-317	59	7

Model Sequence

MNTITQVEKGGLFEISEATLAELKSSKYYNDDLAPTSISERSWTTYSITMLWVGMAICIPSLSLASGLIGLGVSPWLSVLNVALGNILILIPIQLNSQIGTKYGIPFPLFARLTFGTLGAQIPALLRAITACGWTSVQAWVGGGAVGAMIGAFVPKFADEGWTIGLPSWGGIQSVAGGQFIGYVIFMLFVAWVAYNGIDQIKWVQNIGSPILIVVMIALLFWAYSITPDGTGFFEVMAQPNDSVLIAQNGGFALVYLTGLMGNIAFWATMALNIPDFSRYAKTQKDQFRGQLYGMPLPMAACAFIGAYFSQATKMAY

Comments

ESM1

Categories voted by users:

Information

Protein name	Nitrate reductase
Main knot	4₁ (63%)
Global pLDDT	91.31
Species	Clostridiales bacterium
UniProt	A0A316Q4D1
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	317
ESM generation time	2023-06-26: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					87.3	57-306	250	1-56, 307-317	56	11

Model Sequence

Comments

Domain	Bacteria
Family	unclassified Eubacteriales
Species (Full Name)	Clostridiales bacterium
Gene	DBY07_02685
PFAM codes	PF02133
InterPro codes	IPR001248, IPR045225
PDB structures (whole Protein)	-

A0A316Q4D1F1

AF4

Model Sequence

ESM1

Model Sequence