| Protein name |
Retrotransposon protein
|
| Main knot |
31 (55%)
|
| Global pLDDT |
92.52
|
| Species |
Lachnotalea glycerini
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A318ESF5
|
| PDB structures |
-
|
| Model length |
189
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
97.4 | 3-103 | 101 | 1-2, 104-189 | 2 | 86 |
|
Model Sequence |
MQLGLTISLQKHLKLKSPSYGKPADLFFCWELHIIRFQGKNALAAVNANNRFLVLMVGMKAADWKLLQKRFEEAVTAGFLSEGYTKEQIDAYFSLADEPVFTKTHGRKPVGGMNKAIDYLYYLPEPIDPEHLYQEFHCRFLNRDICSPIGFEDYGYPVEFLEVDMNRIGIINDRVNDKNSNIIEFRSGR
|
| Protein name |
Retrotransposon protein
|
| Main knot |
31 (52%)
|
| Global pLDDT |
83.7
|
| Species |
Lachnotalea glycerini
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
189
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
94.4 | 3-102 | 100 | 1-2, 103-189 | 2 | 87 |
|
Model Sequence |
MQLGLTISLQKHLKLKSPSYGKPADLFFCWELHIIRFQGKNALAAVNANNRFLVLMVGMKAADWKLLQKRFEEAVTAGFLSEGYTKEQIDAYFSLADEPVFTKTHGRKPVGGMNKAIDYLYYLPEPIDPEHLYQEFHCRFLNRDICSPIGFEDYGYPVEFLEVDMNRIGIINDRVNDKNSNIIEFRSGR
|
| Domain |
Bacteria
|
| Family |
Lachnospiraceae
|
| Species (Full Name) |
Lachnotalea glycerini
|
| Gene |
C8E03_104171
|
| PDB structures (whole Protein) |
-
|
A0A318ESF5