| Protein name |
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
|
| Main knot |
52 (73%)
|
| Global pLDDT |
88.06
|
| Species |
Yangtze finless porpoise
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A341ATW0
|
| PDB structures |
-
|
| Model length |
329
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
89.5 | 9-221 | 213 | 1-8, 222-329 | 8 | 108 |
|
Model Sequence |
MTGNAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGDTLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQMFEFDAKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQLAEEEPMDTDQGNNMLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNAKKAQETK
|
| Protein name |
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
|
| Main knot |
52 (79%)
|
| Global pLDDT |
88.02
|
| Species |
Yangtze finless porpoise
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
329
|
| ESM generation time |
2023-06-26: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
86.2 | 10-221 | 212 | 1-9, 222-329 | 9 | 108 |
|
Model Sequence |
MTGNAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGDTLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQMFEFDAKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQLAEEEPMDTDQGNNMLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNAKKAQETK
|
| Domain |
Eukaryota
|
| Family |
Phocoenidae
|
| Species (Full Name) |
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) (Neophocaena phocaenoides subsp. asiaeorientalis)
|
| Gene |
UCHL5
|
| PFAM codes |
PF01088, PF18031
|
| InterPro codes |
 IPR001578, IPR017390, IPR033837, IPR036959, IPR038765, IPR041507
|
| PDB structures (whole Protein) |
-
|
A0A341ATW0