A0A348PMW4 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (82%)
Global pLDDT	92.71
Species	Flavobacteriales bacterium
UniProt	A0A348PMW4
Structure Prediction Model	AlphaFold v4: A0A348PMW4
PDB structures	-
Model length	260
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.9	187-230	44	1-186, 231-260	186	30

Model Sequence

MVIESFSNPKYKYLLSLSKSKTRKKDGVFLMEGRPELDLAIKSGYEPAMIAFSEAYIQKSEIVALIGEGNTQFIPLSKALFDSLSYQNVPQNFIGVFSSFSSSLEDLQEGPMVLLEKVEKPGNLGAILRTCDALGIKNVLVTDSPVDLFNPNILRNSRGALFALKCVFTSNEKALEYFRKRGLKVLSAALSDQSIDYRKASVSNSVAYVFGSEANGLSEFWLTNSDENIIIPMQGVVDSLNVSVSVAIILSHHVNGKTNS

Comments

ESM1

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (83%)
Global pLDDT	95.02
Species	Flavobacteriales bacterium
UniProt	A0A348PMW4
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	260
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.3	30-230	201	1-29, 231-260	29	30

Model Sequence

Comments

Domain	Bacteria
Family	unclassified Flavobacteriales
Species (Full Name)	Flavobacteriales bacterium
Gene	DCR48_04035
PFAM codes	PF00588
InterPro codes	IPR001537, IPR029026, IPR029028, IPR029064
PDB structures (whole Protein)	-

A0A348PMW4F1

AF4

Model Sequence

ESM1

Model Sequence