A0A349W130 | AlphaKnot 2.0

AF4

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Information

Protein name	Sodium:solute symporter
Main knot	4₁ (58%)
Global pLDDT	88.68
Species	Sphingobacterium sp
UniProt	A0A349W130
Structure Prediction Model	AlphaFold v4: A0A349W130
PDB structures	-
Model length	325
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					92.2	57-292	236	1-56, 293-325	56	33

Model Sequence

MLGNLDLGIAIFYILLILVVGVLAGSVRFKKVKETSAEGYFLAGKTLRWPAIGLALFATNISTIHLVSLAQSGFDTGLLNGNFEWMAAFTLILLALFFVPFYLKSGVATLPDFLERRYDRASRDWLTFISILSAIVIHIAFSMLAGGIVLRTLFGFNMYLSITVICVITGIYTILGGLRAVVVTESIQTIVLLAGAFIISFAAFDKMGGWTPMKAVLEQDNALDRLSMLRGSNDGSGMPWYAVLFGYPILGIWYWCADQTIVQRVLGAKDENHGRVGALFCGVLKILPVFIFVLPGLFAYTLFRTGQLDLSCLGVDHQGQVNSKG

Comments

ESM1

Categories voted by users:

Information

Protein name	Sodium:solute symporter
Main knot	4₁ (58%)
Global pLDDT	90.51
Species	Sphingobacterium sp
UniProt	A0A349W130
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	325
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.2	51-292	242	1-50, 293-325	50	33

Model Sequence

Comments

Domain	Bacteria
Family	Sphingobacteriaceae
Species (Full Name)	Sphingobacterium sp
Gene	DCW66_15140
PFAM codes	PF00474
InterPro codes	IPR001734, IPR038377
PDB structures (whole Protein)	-

A0A349W130F1

AF4

Model Sequence

ESM1

Model Sequence