A0A350JM21 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (42%)
Global pLDDT	82.29
Species	Flavobacteriales bacterium
UniProt	A0A350JM21
Structure Prediction Model	AlphaFold v4: A0A350JM21
PDB structures	-
Model length	350
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					79.3	127-269	143	1-126, 270-350	126	81

Model Sequence

MIYLTDDCLEISFPELQNYAGIRINFQRTLRIPDDGQLHSLPPGLGKFPLRHIEDFDLTKHNHLKERGGIIMPMFQAEAMWLNFTSIHSFGELEYPIAVKIGTGKICAVSGEGWNSTLNRHPQDYLVVPEQPWIDGYNVKKGRIKQFIAAPMGKGYTVEEQLTDEASVGGLQIQVFPMKQEFYKRFNDQQKQELRDRSFDEQSVMYSIEPSCLEVNYSSEPSLEMGLAPGGSMRQEIYEDPYDLEVWDMRKSERCFVTIANADQWMSITGEEPPMAPITAGEYTKAGLPWFEYYGDDQTAIEGAKLLGNIKSVKNITSTDGENIWPKDQSAFKAKLAWLTKRTISAGKWP

Comments

ESM1

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (65%)
Global pLDDT	66.91
Species	Flavobacteriales bacterium
UniProt	A0A350JM21
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	350
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					81.8	26-276	251	1-25, 277-350	25	74

Model Sequence

Comments

Domain	Bacteria
Family	unclassified Flavobacteriales
Species (Full Name)	Flavobacteriales bacterium
Gene	DCX14_12980
PDB structures (whole Protein)	-

A0A350JM21F1

AF4

Model Sequence

ESM1

Model Sequence