A0A354J5U3 | AlphaKnot 2.0

AF6

Categories voted by users:

Information

Protein name	Tetratricopeptide repeat protein
Main knot	8₃ (48%)
Global pLDDT	91.04
Species	Lachnospiraceae bacterium
UniProt	A0A354J5U3
Structure Prediction Model	AlphaFold v6: A0A354J5U3
PDB structures	-
Model length	472
AlphaFold deposition date	2026-06-01
AlphaKnot deposition date	2026-07-09

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.4	14-466	453	1-13, 467-472	13	6		Knot
					91.1	98-433	336	1-97, 434-472	97	39		Knot

Model Sequence

MKTSLTEVCNQIKKGKYPEENIPKLFNYLANQYNTYARVNLVMHYETFYESYLEDHENWSEEAQDIVSKINRIIHDNLLLNNNAEKEKIIKEVDELRKEIMKRMNYLSIYLDIFQIYEYVFNRTEYRFKQDEIITVEDDDFARKILRYIFDTEDNVVINAKIMETIGQLPVRITKQRFFTILRESLQNYLGRERSTLNTFLYMLRTNAMLISEEGMKNDYPRLWEQKEALAALRYNEISEEKFLEAEKVLRQAAAFLNIESSVYYSLQEIINEVYAILLISTYAGIVETDTPVSEETIHTILGEINTAFLSEDKAELAKKLETKFEELEGIQENVVYTFIETDDVLNEVDKNYRKLTESLMIDPFLNVLLRTRQLLSDSLFIDLEEEAADSKVSESLIESEAEKIEEDMTALFASHDRMIARAVMANTLGNVPVFFKNRTEVMNYVRYSLEHCKDPYEKAACVEIINKLIIE

Comments

AF4

Categories voted by users:

Information

Protein name	Tetratricopeptide repeat protein
Main knot	8₃ (48%)
Global pLDDT	91.31
Species	Lachnospiraceae bacterium
UniProt	A0A354J5U3
Structure Prediction Model	AlphaFold v4: A0A354J5U3
PDB structures	-
Model length	472
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.3	33-463	431	1-32, 464-472	32	9

Model Sequence

Comments

Domain	Bacteria
Family	Lachnospiraceae
Species (Full Name)	Lachnospiraceae bacterium
Gene	DDY59_08085 DEP17_06005 DIW41_00925
PDB structures (whole Protein)	-

A0A354J5U3F1

AF6

Model Sequence

AF4

Model Sequence