A0A356J562 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (85%)
Global pLDDT	92.55
Species	Verrucomicrobia bacterium
UniProt	A0A356J562
Structure Prediction Model	AlphaFold v4: A0A356J562
PDB structures	-
Model length	285
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.1	194-235	42	1-193, 236-285	193	50

Model Sequence

MDITSPSNPKLKHVVKLRTCSTRDESGEMIVEGFRECRRALDRGYRPYAIFHCPDFYLKNENEAQLIADAEKAGAQVYACTKTCFAKIAYKERPDGLLMVGPHVSIKLEDLKLPPRALVLVTEAIEKPGNLGTILRSADAAGAAAVVVCDRTTDIHNPNVVRASTGTMFSVPIVEATSTEALAYLKAHGFSILAATPHAERLHFEVDLTGNVAIALGAEQYGLTAKWMDGADLRVRIPMLGMADSLNVSAAATILAYEAVRQRISAGIDKVPACIPWHGEGSHDK

Comments

ESM1

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (82%)
Global pLDDT	93.32
Species	Verrucomicrobia bacterium
UniProt	A0A356J562
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	285
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.7	194-235	42	1-193, 236-285	193	50

Model Sequence

Comments

Domain	Bacteria
Family	unclassified Verrucomicrobia
Species (Full Name)	Verrucomicrobia bacterium
Gene	DD637_05275 DER26_06675
PFAM codes	PF00588
InterPro codes	IPR001537, IPR013123, IPR029026, IPR029028, IPR029064
PDB structures (whole Protein)	-

A0A356J562F1

AF4

Model Sequence

ESM1

Model Sequence