A0A356R9Y6F1

TraB/GumN family protein
AF4
Categories voted by users:
Information
Protein name
TraB/GumN family protein
Main knot
52 (80%)
Global pLDDT
84.18
Species
Nitrospiraceae bacterium
UniProt
Structure Prediction Model
AlphaFold v4:  A0A356R9Y6
PDB structures
-
Model length
312
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
85.8 20-230 211 1-19, 231-312 19 82
Model Sequence
MTTSHDHQQPKPHPRYLFILILFVFGTGTVNGQVIGDGYNNSLIYKIQSDTNTVYILGSIHVLAEEYYPLTRSFSYAYYNSQKVVFEIDPEILFSPDSFAKHEKQYTLPKGKTLETVLSPKTYALVKQKIKALGGNIQNVQQYKPWVLYLTLSGQFDLSIDFRPELGIENHFFRMAKDAGKPTGGLETIQDQLNVFDTLPLSLQEALLQESLAITGSKEREQAFLRMVKDWHQGNLNGLELLVESFKTYPLFYKKLLVQRNQNWIPQIESFLKEENNVLIIVGAAHLPGKEGLLALLTEKGHHIERVSFAMP
Comments
ESM1
Categories voted by users:
Information
Protein name
TraB/GumN family protein
Main knot
52 (78%)
Global pLDDT
88.21
Species
Nitrospiraceae bacterium
UniProt
Structure Prediction Model
PDB structures
-
Model length
312
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
60.9 1-312 312 0 0
Model Sequence
MTTSHDHQQPKPHPRYLFILILFVFGTGTVNGQVIGDGYNNSLIYKIQSDTNTVYILGSIHVLAEEYYPLTRSFSYAYYNSQKVVFEIDPEILFSPDSFAKHEKQYTLPKGKTLETVLSPKTYALVKQKIKALGGNIQNVQQYKPWVLYLTLSGQFDLSIDFRPELGIENHFFRMAKDAGKPTGGLETIQDQLNVFDTLPLSLQEALLQESLAITGSKEREQAFLRMVKDWHQGNLNGLELLVESFKTYPLFYKKLLVQRNQNWIPQIESFLKEENNVLIIVGAAHLPGKEGLLALLTEKGHHIERVSFAMP
Comments
Domain Bacteria
Family Nitrospiraceae
Species (Full Name) Nitrospiraceae bacterium
Gene DD706_11325
PFAM codes  PF01963
InterPro codes  IPR002816
PDB structures (whole Protein) -
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