| Protein name |
Haloperoxidase
|
| Main knot |
61 (51%)
|
| Global pLDDT |
92.81
|
| Species |
Rhodospirillaceae bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v6:
 A0A357V229
|
| PDB structures |
-
|
| Model length |
283
|
| AlphaFold deposition date |
2026-06-01
|
| AlphaKnot deposition date |
2026-07-09
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |
94.31 | 59-278 | 220 | 1-58, 279-283 | 58 | 5 |
|
Knot |
Model Sequence |
MTTFPEVHFADADPATLRVYRNLMTAAGSGSPALIFRHMATYPGLLDWIWAAVGPDVEAGWPGTAVWRIVADQGAVPLPAFTEDDLAEAGLDAEARTTVGHMLTSYNRMNPVNLIAVGAARALIAGDDMPPPTQPFSEAAATPPAPPPDLPPPLKLAGLDDGPRETITHICRTIPKAEIAGTPVDVTPTMYLHFAHWPGFMDLVAGRLDTALPEIDAATHAFADACKPLIGQLLAKAKARNPGPVPMADPTPLIRVMDTFAYVIPHMVVVGAALEAALKPKTG
|
| Protein name |
Haloperoxidase
|
| Main knot |
61 (48%)
|
| Global pLDDT |
92.98
|
| Species |
Rhodospirillaceae bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
A0A357V229
|
| PDB structures |
-
|
| Model length |
283
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
94.3 | 60-270 | 211 | 1-59, 271-283 | 59 | 13 |
|
Model Sequence |
MTTFPEVHFADADPATLRVYRNLMTAAGSGSPALIFRHMATYPGLLDWIWAAVGPDVEAGWPGTAVWRIVADQGAVPLPAFTEDDLAEAGLDAEARTTVGHMLTSYNRMNPVNLIAVGAARALIAGDDMPPPTQPFSEAAATPPAPPPDLPPPLKLAGLDDGPRETITHICRTIPKAEIAGTPVDVTPTMYLHFAHWPGFMDLVAGRLDTALPEIDAATHAFADACKPLIGQLLAKAKARNPGPVPMADPTPLIRVMDTFAYVIPHMVVVGAALEAALKPKTG
|
| Protein name |
Haloperoxidase
|
| Main knot |
61 (53%)
|
| Global pLDDT |
91.98
|
| Species |
Rhodospirillaceae bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
283
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
91.8 | 60-270 | 211 | 1-59, 271-283 | 59 | 13 |
|
Model Sequence |
MTTFPEVHFADADPATLRVYRNLMTAAGSGSPALIFRHMATYPGLLDWIWAAVGPDVEAGWPGTAVWRIVADQGAVPLPAFTEDDLAEAGLDAEARTTVGHMLTSYNRMNPVNLIAVGAARALIAGDDMPPPTQPFSEAAATPPAPPPDLPPPLKLAGLDDGPRETITHICRTIPKAEIAGTPVDVTPTMYLHFAHWPGFMDLVAGRLDTALPEIDAATHAFADACKPLIGQLLAKAKARNPGPVPMADPTPLIRVMDTFAYVIPHMVVVGAALEAALKPKTG
|
| Domain |
Bacteria
|
| Family |
Rhodospirillaceae
|
| Species (Full Name) |
Rhodospirillaceae bacterium
|
| Gene |
DEB21_06070 DIW51_02760
|
| PDB structures (whole Protein) |
-
|
A0A357V229