A0A365ZXP4 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (83%)
Global pLDDT	92.54
Species	Streptomyces sp
UniProt	A0A365ZXP4
Structure Prediction Model	AlphaFold v4: A0A365ZXP4
PDB structures	-
Model length	285
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					92.2	200-245	46	1-199, 246-285	199	40

Model Sequence

MGPAAELISPRASRVAAAKRLLRRAARGRERRFLAEGPQAVREAVAHRDGDVSTLVELFATPEAAERHPDVVAAARSAGARVHLAAPAVLADLSGTVTPQGLVGVCRFLDRPLAEITAAAPRLVAVLAHVRDPGNAGTVLRCADAAGADAVILTDASVDLYNPKAVRASAGSIFHLPVALGVPVDEAVAALSGAGVRVVAADGGGERDLDAELDDGAMGRPTAWIFGNEAWGLPAGTRALADAVVRVPLHGRAESLNLATAAAVCLYASARAQRAPGGCRSAARA

Comments

ESM1

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (84%)
Global pLDDT	95.08
Species	Streptomyces sp
UniProt	A0A365ZXP4
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	285
ESM generation time	2023-06-26: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					95.5	36-135	100	1-35, 136-285	35	150

Model Sequence

Comments

Domain	Bacteria
Family	Streptomycetaceae
Species (Full Name)	Streptomyces sp. PT12
Gene	DEH69_01170
PFAM codes	PF00588, PF08032
InterPro codes	IPR001537, IPR013123, IPR029026, IPR029028, IPR029064
PDB structures (whole Protein)	-

A0A365ZXP4F1

AF4

Model Sequence

ESM1

Model Sequence