A0A370LSG5F1

Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-) (16S rRNA (pseudouridine-N1-)-methyltransferase Nep1)
AF4
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-) (16S rRNA (pseudouridine-N1-)-methyltransferase Nep1)
Main knot
31 (82%)
Global pLDDT
96.65
Species
Crenarchaeota archaeon
UniProt
Structure Prediction Model
AlphaFold v4:  A0A370LSG5
PDB structures
-
Model length
221
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
96.4 151-196 46 1-150, 197-221 150 25
Model Sequence
MLSLIIAESSLELVPRELQSHISIKSHAKKLGKYPSEILLDNSWHFAAMKGLENEIKRGRPDIVHLCLLAATSIPLYHENEIEIYVHTVDNKVIILGDNVRLPKSYHRFAGIIEKLFKDKVIKTDDSVLMELKKMTFDELIEMIEPKSVIALSPDGMPSNYQSVGKELDDSCLIVGGFQKGAFSDEITQHIDRTYSIGEQSFEAHVVISRILYEYEKTIFM
Comments
ESM1
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-) (16S rRNA (pseudouridine-N1-)-methyltransferase Nep1)
Main knot
31 (83%)
Global pLDDT
91.48
Species
Crenarchaeota archaeon
UniProt
Structure Prediction Model
PDB structures
-
Model length
221
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
93.5 151-196 46 1-150, 197-221 150 25
Model Sequence
MLSLIIAESSLELVPRELQSHISIKSHAKKLGKYPSEILLDNSWHFAAMKGLENEIKRGRPDIVHLCLLAATSIPLYHENEIEIYVHTVDNKVIILGDNVRLPKSYHRFAGIIEKLFKDKVIKTDDSVLMELKKMTFDELIEMIEPKSVIALSPDGMPSNYQSVGKELDDSCLIVGGFQKGAFSDEITQHIDRTYSIGEQSFEAHVVISRILYEYEKTIFM
Comments
Domain Archaea
Family unclassified Crenarchaeota
Species (Full Name) Crenarchaeota archaeon
Gene nep1 DWQ13_03475 DWQ17_03870 DWQ18_01345 DWQ19_08240
PFAM codes  PF03587
InterPro codes  IPR005304,  IPR023503,  IPR029026,  IPR029028
PDB structures (whole Protein) -
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