A0A371NAJ0 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	RNA-binding protein
Main knot	3₁ (85%)
Global pLDDT	93.21
Species	Methanothermobacter defluvii
UniProt	A0A371NAJ0
Structure Prediction Model	AlphaFold v4: A0A371NAJ0
PDB structures	-
Model length	263
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.3	2-229	228	1-1, 230-263	1	34

Model Sequence

MSIFIPDSLTAETGDLKIKTYKVGLIARAASIFGVKRIVIYHDDADGEARFIRDILTYMDTPQYLRRKVFPIMRELKHVGILPPLRTPHHPTGKPVTGEYRQGLTVKRVKKGTLVDIGADKLALCREKLTVNRIMSFRVVRLGKEILIEPDEPEDRYWGYEVLDTRRNLAESLKTVGADVVVATSRNASPITSILDEVKTRMRGAREAAILFGGPYKGLPEIDADIWVNTLPGQCTETVRTEEAVLATLSVFNMLTQIDEKDE

Comments

ESM1

Categories voted by users:

Information

Protein name	RNA-binding protein
Main knot	3₁ (79%)
Global pLDDT	90.1
Species	Methanothermobacter defluvii
UniProt	A0A371NAJ0
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	263
ESM generation time	2023-06-26: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					92.2	2-229	228	1-1, 230-263	1	34

Model Sequence

Comments

Domain	Archaea
Family	Methanobacteriaceae
Species (Full Name)	Methanothermobacter defluvii
Gene	C7452_1541
PFAM codes	PF02598
InterPro codes	IPR003750, IPR012340, IPR029026, IPR029028
PDB structures (whole Protein)	-

A0A371NAJ0F1

AF4

Model Sequence

ESM1

Model Sequence