A0A372DL17 | AlphaKnot 2.0

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Information

Protein name	Thioredoxin domain-containing protein
Main knot	5₁ (92%)
Global pLDDT	82.3
Species	Limnothrix sp
UniProt	A0A372DL17
Structure Prediction Model	AlphaFold v6: A0A372DL17
PDB structures	-
Structure in AlphaLasso	A0A372DL17: LS_2++C
Model length	120
AlphaFold deposition date	2026-06-01
AlphaKnot deposition date	2026-07-09

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.15	54-108	55	1-53, 109-120	53	12		Knot
					96.9	65-98	34	1-64, 99-120	64	22		Knot

MAGDRRRQPWRLSLSRGLLIGAIGLILSLWSLGARANSPSTCQYKERPLFGKVQIVESFPDFTVQVVEAFPDLKVQIVNAFPDRCGEWQFVNAFPDFKIKFVTAFPDLKIQFVTSFPGLT

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Categories voted by users:

Information

Protein name	Thioredoxin domain-containing protein
Main knot	5₁ (95%)
Global pLDDT	83.1
Species	Limnothrix sp
UniProt	A0A372DL17
Structure Prediction Model	AlphaFold v4: A0A372DL17
PDB structures	-
Structure in AlphaLasso	A0A372DL17: LS_2++C
Model length	120
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.2	53-110	58	1-52, 111-120	52	10

MAGDRRRQPWRLSLSRGLLIGAIGLILSLWSLGARANSPSTCQYKERPLFGKVQIVESFPDFTVQVVEAFPDLKVQIVNAFPDRCGEWQFVNAFPDFKIKFVTAFPDLKIQFVTSFPGLT

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Categories voted by users:

Information

Protein name	Thioredoxin domain-containing protein
Main knot	0₁ (93%)
Species	Limnothrix sp
UniProt	A0A372DL17
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A372DL17: LS_2++C
Model length	120
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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MAGDRRRQPWRLSLSRGLLIGAIGLILSLWSLGARANSPSTCQYKERPLFGKVQIVESFPDFTVQVVEAFPDLKVQIVNAFPDRCGEWQFVNAFPDFKIKFVTAFPDLKIQFVTSFPGLT

Comments

Domain	Bacteria
Family	Pseudanabaenaceae
Species (Full Name)	Limnothrix sp. CACIAM 69d
Gene	BJG00_007215
PDB structures (whole Protein)	-

A0A372DL17F1