| Protein name |
Serine protease
|
| Main knot |
31 (83%)
|
| Global pLDDT |
72.2
|
| Species |
Pseudomonas testosteroni
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A373FM36
|
| PDB structures |
-
|
| Model length |
303
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
72.6 | 109-248 | 140 | 1-108, 249-303 | 108 | 55 |
|
Model Sequence |
METLYMSSERINHSITRSHLLRATLLCAAVAATVSTASALSPRADGGNDDSGIISGPIADVSIVDRTTGQVLPIYRYRGELWVAGRTGGNYAVRFRNLQDRRIMGVISVDGVNAVTGKTASSRANDGYVLDAGDSYDVTGWRKSNSSVAAFYFSESDMSYASRTGRPGDVGVIGVALYREKLPEPPAYQPDYGRVYEESSSAVAADAAAPNAAAKEKSRSSTPRATPSLGTGHGKVERSEVNTVDFEADTSRPRQIVRIRYDSYDNLVAKRVIPVPTVPRRPAPRTPSAFPGDNGYVPDPPRN
|
| Protein name |
Serine protease
|
| Main knot |
820 (73%)
|
| Global pLDDT |
79.75
|
| Species |
Pseudomonas testosteroni
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
303
|
| ESM generation time |
2023-06-22: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
58.1 | 4-252 | 249 | 1-3, 253-303 | 3 | 51 |
|
Model Sequence |
METLYMSSERINHSITRSHLLRATLLCAAVAATVSTASALSPRADGGNDDSGIISGPIADVSIVDRTTGQVLPIYRYRGELWVAGRTGGNYAVRFRNLQDRRIMGVISVDGVNAVTGKTASSRANDGYVLDAGDSYDVTGWRKSNSSVAAFYFSESDMSYASRTGRPGDVGVIGVALYREKLPEPPAYQPDYGRVYEESSSAVAADAAAPNAAAKEKSRSSTPRATPSLGTGHGKVERSEVNTVDFEADTSRPRQIVRIRYDSYDNLVAKRVIPVPTVPRRPAPRTPSAFPGDNGYVPDPPRN
|
| Domain |
Bacteria
|
| Family |
Comamonadaceae
|
| Species (Full Name) |
Comamonas testosteroni (Pseudomonas testosteroni)
|
| Gene |
DZC30_09500
|
| PDB structures (whole Protein) |
-
|
A0A373FM36