A0A381S5P9 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Sodium/alanine symporter
Main knot	4₁ (46%)
Global pLDDT	90.95
Species	marine metagenome
UniProt	A0A381S5P9
Structure Prediction Model	AlphaFold v4: A0A381S5P9
PDB structures	-
Model length	360
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.2	73-323	251	1-72, 324-360	72	37

Model Sequence

MINIESAIEAFASFMWGPFLLILLVFGGLFFTVYCRFIPFRYFKHGLDILLGKYDNDDDPGDINHFQALSAALAGTVGMGNISGVAVAIHMGGPGALFWMWVSAFVGMSTKFFTCTLAILFRGEDDLGELQGGPMYVIQEGLGQKFKPLAVLFSTAGLIGCLPMFQANQLTQYIRDSVFLPLGMFSSNPFIGNVVTGILIAILVAGVIFGGIKRIGLVAGRIVPIMVLIYLLGGLGILIKNYDKLGSIFNLIITDAFTGNAVVGGIVGEVIRQGIRRAVFSNEAGLGTEVMAHGAAKTKEPVREGLVAMIGPFIDTILVCSITAFAILVSGVWNDPALNGVSMTAKAFSNELGLLGEFIL

Comments

ESM1

Categories voted by users:

Information

Protein name	Sodium/alanine symporter
Main knot	4₁ (55%)
Global pLDDT	92.64
Species	marine metagenome
UniProt	A0A381S5P9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	360
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.2	71-322	252	1-70, 323-360	70	38

Model Sequence

Comments

Domain	Unclassified
Family	ecological metagenomes
Species (Full Name)	marine metagenome
Gene	METZ01_LOCUS52230
PFAM codes	PF01235
InterPro codes	IPR001463
PDB structures (whole Protein)	-

A0A381S5P9F1

AF4

Model Sequence

ESM1

Model Sequence