A0A382LBA1 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Amino acid permease
Main knot	4₁ (55%)
Global pLDDT	89.54
Species	marine metagenome
UniProt	A0A382LBA1
Structure Prediction Model	AlphaFold v4: A0A382LBA1
PDB structures	-
Model length	290
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.5	26-253	228	1-25, 254-290	25	37

Model Sequence

MPTMALDESRRLRLHTATGLVVASMIGTGVYTSLGYQADALSLTTSLLLLWVVGGIHALCGAFCYAELSAALPRSGGEYHLLSRIYHPFLGFLAGWVSVTVSFAAPIALAAIAFDTYAGPLLPAMPKGVLACLLILFMTIAHCRGIRAGARTQDWLTVVKLLLLSGFIIAGFLAPVEETNLAAPFSLDFSELLGGGFAVSLVYVSYSYTGWNAAVYVAGETREPARTLPIALLAGVVVVTILYLSLNYAFLRVTPLEEIRSLENKEVVAVLGAQHIFGDSGSQWLRGIIA

Comments

ESM1

Categories voted by users:

Information

Protein name	Amino acid permease
Main knot	4₁ (48%)
Global pLDDT	91.85
Species	marine metagenome
UniProt	A0A382LBA1
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	290
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					88.4	26-256	231	1-25, 257-290	25	34

Model Sequence

Comments

Domain	Unclassified
Family	ecological metagenomes
Species (Full Name)	marine metagenome
Gene	METZ01_LOCUS286962
PFAM codes	PF13520
InterPro codes	IPR002293
PDB structures (whole Protein)	-

A0A382LBA1F1

AF4

Model Sequence

ESM1

Model Sequence