A0A383WII2 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (77%)
Global pLDDT	86.42
Species	Green alga
UniProt	A0A383WII2
Structure Prediction Model	AlphaFold v4: A0A383WII2
PDB structures	-
Model length	370
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.2	9-220	212	1-8, 221-370	8	150

Model Sequence

MAGKGETWTTIESDPGVFTELIQQIGVKGVQVEELYSLDPDSLRSVKPVYGLIFLFKWRHEKDERPVDSSEDASKVFFASQVINNACATQAILSILLNCPQLQLGQELSNFREFTADFPPELKGLAISNSDSIRTAHNSFARPEPLVPDEQRTAGDDDDVYHFIGYVPVNGKLYELDGLKQGPITLADAVDQDSWLDEVAPHIQARIARYAANEIRFNLMAVIGDRQAALQQQLAQAQAKRQAVSDKLSGGSGAAAMETDAAGSSAHQEQPLVLPDDEAALQQLLAEAADEAERLQDALAAEQAKRANWHAENIRRKHNYIPFLFNFLKLLAEKKKLKRLIDEALEKQQLQQAERAVKQAKGATASQQST

Comments

ESM1

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (74%)
Global pLDDT	90.19
Species	Green alga
UniProt	A0A383WII2
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	370
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.8	10-220	211	1-9, 221-370	9	150

Model Sequence

Comments

Domain	Eukaryota
Family	Scenedesmaceae
Species (Full Name)	Tetradesmus obliquus (Green alga) (Acutodesmus obliquus)
Gene	BQ4739_LOCUS17645
PFAM codes	PF01088, PF18031
InterPro codes	IPR001578, IPR017390, IPR036959, IPR038765, IPR041507
PDB structures (whole Protein)	-

A0A383WII2F1

AF4

Model Sequence

ESM1

Model Sequence