A0A397HZA5 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (78%)
Global pLDDT	81.05
Species	Diversispora epigaea
UniProt	A0A397HZA5
Structure Prediction Model	AlphaFold v4: A0A397HZA5
PDB structures	-
Model length	393
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					81.1	17-247	231	1-16, 248-393	16	146

Model Sequence

MSSLILSHKERAEGPWVKLQSEPTLFTALMNSLGIKGAKATEVFVLDLQDNFDDIGEIYGFVFLFKMNETKGGPLNDNIDYDEEFLEDYPPNVYFANQVVDNACATLAVLNIALNCPQLEIEQELKEFKEFTWELPPATRGFSITTHPNFRQIHNSMARHPEDSLIVEEEEANKKKKDSSNEEKGEVYHYIAYVPVDEEVWQLDGLYPRPIKIGTYTDEKIWYDAARGVINERIDIFHAEQVEYVLLAITKDQNSIHLDRVKDCLYIKKVAENRLDELSKTWRETNVDDIEEILTDDDELKLLKRGNVDIDITNLMKNFDDVEKIERTRAKAVNEIKFLLEAIDREIKMKEVEKERRTFDYGPFIREFISILHERGELKGLLANADDMDEGDE

Comments

ESM1

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (72%)
Global pLDDT	84.53
Species	Diversispora epigaea
UniProt	A0A397HZA5
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	393
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.6	26-347	322	1-25, 348-393	25	46

Model Sequence

Comments

Domain	Eukaryota
Family	Diversisporaceae
Species (Full Name)	Diversispora epigaea
Gene	Glove_294g144
PFAM codes	PF01088
InterPro codes	IPR001578, IPR036959, IPR038765
PDB structures (whole Protein)	-

A0A397HZA5F1

AF4

Model Sequence

ESM1

Model Sequence