A0A3B0SZW9 | AlphaKnot 2.0

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Information

Protein name	NmrA domain-containing protein
Main knot	5₁ (84%)
Global pLDDT	84.52
Species	hydrothermal vent
UniProt	A0A3B0SZW9
Structure Prediction Model	AlphaFold v4: A0A3B0SZW9
PDB structures	-
Structure in AlphaLasso	A0A3B0SZW9: LS_2++C
Model length	94
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.6	27-84	58	1-26, 85-94	26	10

MAPPTANAASVIGDDCTFKGFALHGKVQIVESFPDIKVKIVDSFPDLKVRVVTSFADKCGMWTFVESFPDIKIQYVDSFPDLKIQLVTSYPGLP

Comments

Categories voted by users:

Information

Protein name	NmrA domain-containing protein
Main knot	7₂ (73%)
Global pLDDT	57.31
Species	hydrothermal vent
UniProt	A0A3B0SZW9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A3B0SZW9: LS_2++C
Model length	94
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					33.6	9-84	76	1-8, 85-94	8	10

MAPPTANAASVIGDDCTFKGFALHGKVQIVESFPDIKVKIVDSFPDLKVRVVTSFADKCGMWTFVESFPDIKIQYVDSFPDLKIQLVTSYPGLP

Comments

Domain	Unclassified
Family	ecological metagenomes
Species (Full Name)	hydrothermal vent metagenome
Gene	MNBD_ALPHA05-1888
PDB structures (whole Protein)	-

A0A3B0SZW9F1