A0A3B1A2Z9F1

PDZ domain-containing protein
AF4
Categories voted by users:
Information
Protein name
PDZ domain-containing protein
Main knot
31 (61%)
Global pLDDT
89.51
Species
hydrothermal vent
UniProt
Structure Prediction Model
AlphaFold v4:  A0A3B1A2Z9
PDB structures
-
Model length
391
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
89.4 4-304 301 1-3, 305-391 3 87
Model Sequence
CATNGVNENEVSEEEPRPLIGNPEMPYPPEKEPEVGDILHMPTGLYVTQAQMMASALDQRIIYVGETHDSPAAHRFQLDVLKAMVERYPGEVVLGMEVFIPKQQAVIDKWVAGELDEPSFLRQSQWFKVWRADFAYYRELLEFARDNRIPVRGLNVEKALVRAVGSNPPDQLSEEQRQQLPDMSFVDPYQQAMVEAVFSGHGPGGKHVEGFKRVQVLWDQTMAENMVDYLQSPEGKGKRMMVVAGGHHVRYGYGIPRRVFNLMPTSYTVLGTREIVIPEEKQHQIMDITMPRFPMTAYDFVKHVVYETLPSKGVKLGVMFNMVEGGLKINQVIPESNAALAELQVDDLISHIDGVVMKDLYDIKYLLEKKSMGDSAQLQLTRNDEVIEVVV
Comments
ESM1
Categories voted by users:
Information
Protein name
PDZ domain-containing protein
Main knot
01 (91%)
Species
hydrothermal vent
UniProt
Structure Prediction Model
PDB structures
-
Model length
391
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Model Sequence
CATNGVNENEVSEEEPRPLIGNPEMPYPPEKEPEVGDILHMPTGLYVTQAQMMASALDQRIIYVGETHDSPAAHRFQLDVLKAMVERYPGEVVLGMEVFIPKQQAVIDKWVAGELDEPSFLRQSQWFKVWRADFAYYRELLEFARDNRIPVRGLNVEKALVRAVGSNPPDQLSEEQRQQLPDMSFVDPYQQAMVEAVFSGHGPGGKHVEGFKRVQVLWDQTMAENMVDYLQSPEGKGKRMMVVAGGHHVRYGYGIPRRVFNLMPTSYTVLGTREIVIPEEKQHQIMDITMPRFPMTAYDFVKHVVYETLPSKGVKLGVMFNMVEGGLKINQVIPESNAALAELQVDDLISHIDGVVMKDLYDIKYLLEKKSMGDSAQLQLTRNDEVIEVVV
Comments
Domain Unclassified
Family ecological metagenomes
Species (Full Name) hydrothermal vent metagenome
Gene MNBD_GAMMA18-1388
PFAM codes  PF04187,  PF13180
InterPro codes  IPR001478,  IPR007314,  IPR036034
PDB structures (whole Protein) -
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