A0A3B8LZR6 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (47%)
Global pLDDT	87.01
Species	Planctomycetaceae bacterium
UniProt	A0A3B8LZR6
Structure Prediction Model	AlphaFold v4: A0A3B8LZR6
PDB structures	-
Model length	345
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					87.8	24-262	239	1-23, 263-345	23	83

Model Sequence

MIELKNDSLVFSFDGVHPQARLSLNLMRTLRIPDDDTTHLLPPGLGRFPLRHVDDFATSVPDQWVTHGGVMFPMYQSEAMWLSFDSNYLQSRGTSYPFAIKIAAGKINAVTGDTWTDHLEEDPQDYMVSPTQPWLDGYCIEKDVIRQFVAMPLGSGYTAEEQISGAAEHGGLQILVHPMKRAVFERRFPERVEQQYYVACYDSSPETCFAEAEPMEIGLAPGGRMRQEIYEDPFDINDWDTAQASRCFVHITNSLVWRSITGDDPPTTPPTSREYTEAGFPWFDYYSDGETRLEGSRTLQKLKSVATLGQEKADIPLPENDSIDVEHVVTIREGLGRDQVREGSF

Comments

ESM1

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (59%)
Global pLDDT	68.24
Species	Planctomycetaceae bacterium
UniProt	A0A3B8LZR6
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	345
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					80.0	26-267	242	1-25, 268-345	25	78

Model Sequence

Comments

Domain	Bacteria
Family	Planctomycetaceae
Species (Full Name)	Planctomycetaceae bacterium
Gene	DCE39_13330
PDB structures (whole Protein)	-

A0A3B8LZR6F1

AF4

Model Sequence

ESM1

Model Sequence