| Protein name |
Transthyretin-like family protein
|
| Main knot |
51 (87%)
|
| Global pLDDT |
89.12
|
| Species |
Flavobacteriales bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v6:
A0A3B9H776
|
| PDB structures |
-
|
| Structure in AlphaLasso |
A0A3B9H776: LS2++C L0
|
| Model length |
95
|
| AlphaFold deposition date |
2026-06-01
|
| AlphaKnot deposition date |
2026-07-09
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
95.54 | 29-84 | 56 | 1-28, 85-95 | 28 | 11 |
|
Knot | ||||
|
|
94.97 | 40-74 | 35 | 1-39, 75-95 | 39 | 21 | Knot |
Model Sequence |
MDEKKNLIKKLLSCEDCDWEGIKLCGKVQFVTSFPDIKIQYVTSFPDIKVKFVDAFPDDCGEWQEVSSFPDFKVQIVNSFPDLKVQKVTSFPGMN
|
| Protein name |
Transthyretin-like family protein
|
| Main knot |
51 (86%)
|
| Global pLDDT |
89.12
|
| Species |
Flavobacteriales bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
A0A3B9H776
|
| PDB structures |
-
|
| Structure in AlphaLasso |
A0A3B9H776: LS2++C L0
|
| Model length |
95
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
95.6 | 28-86 | 59 | 1-27, 87-95 | 27 | 9 |
|
Model Sequence |
MDEKKNLIKKLLSCEDCDWEGIKLCGKVQFVTSFPDIKIQYVTSFPDIKVKFVDAFPDDCGEWQEVSSFPDFKVQIVNSFPDLKVQKVTSFPGMN
|
| Protein name |
Transthyretin-like family protein
|
| Main knot |
01 (90%)
|
| Species |
Flavobacteriales bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Structure in AlphaLasso |
A0A3B9H776: LS2++C L0
|
| Model length |
95
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
Model Sequence |
MDEKKNLIKKLLSCEDCDWEGIKLCGKVQFVTSFPDIKIQYVTSFPDIKVKFVDAFPDDCGEWQEVSSFPDFKVQIVNSFPDLKVQKVTSFPGMN
|
| Domain |
Bacteria
|
| Family |
unclassified Flavobacteriales
|
| Species (Full Name) |
Flavobacteriales bacterium
|
| Gene |
DCF89_05425
|
| PDB structures (whole Protein) |
-
|