A0A3C0YF46 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Sodium-dependent transporter
Main knot	4₁ (43%)
Global pLDDT	92.01
Species	Gammaproteobacteria bacterium
UniProt	A0A3C0YF46
Structure Prediction Model	AlphaFold v4: A0A3C0YF46
PDB structures	-
Model length	320
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					93.0	23-273	251	1-22, 274-320	22	47

Model Sequence

MVAANRQWGSRGAFLLASIGFAVGLGNIWRFPYVTGENGGSAFVIIYLACAFVIGVPILMAELLVGRRGGMAPVRAVANVALEGGLSQRWAGIGYLNQLTAFSIMTVYAVVAGWVLYYCFLALNGAVAAQTGADAAATFDALLASPTRLGLWSFIALSLTGLILSAGLEKGIERAVKVLMPTLFALLLMLMIYNVFAGGMPEAIQYLFQPDFSKVGPDTFLAALGQAFFSIGVAMAGMMIFGAYLPKEISIARSALIIVAADTAVALVAGLVIFPMVFHGGLDPAQGSGLIFNTLPLAFAQMSGGPWVAIAFFLLLSVAA

Comments

ESM1

Categories voted by users:

Information

Protein name	Sodium-dependent transporter
Main knot	4₁ (43%)
Global pLDDT	94.33
Species	Gammaproteobacteria bacterium
UniProt	A0A3C0YF46
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	320
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					93.2	23-273	251	1-22, 274-320	22	47

Model Sequence

Comments

Domain	Bacteria
Family	unclassified Gammaproteobacteria
Species (Full Name)	Gammaproteobacteria bacterium
Gene	DCP57_01165
PFAM codes	PF00209
InterPro codes	IPR000175, IPR037272
PDB structures (whole Protein)	-

A0A3C0YF46F1

AF4

Model Sequence

ESM1

Model Sequence