A0A3D0DQB0F1

Oligopeptide transporter, OPT family
AF4
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Information
Protein name
Oligopeptide transporter, OPT family
Main knot
52 (53%)
Global pLDDT
84.5
Species
Massilia sp
UniProt
Structure Prediction Model
AlphaFold v4:  A0A3D0DQB0
PDB structures
-
Model length
757
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
84.5 93-693 601 1-92, 694-757 92 64
Model Sequence
MPYDPAPPAVKPYIPASANLPEMTVRALVMGVVLGMVFGASSLYLVLKVGLTVSASIPGAVIAITLFGMFRKMGGRESSILENSITQTAGSAGESLAFGLGATMPAIMILGFDLEISRVMLVGILGGLLGILMMIPMRRTMIVDAHRELKYPEGTACAEVLKAAATETSRAAAGEQREAGSDAEKDAKRRAAIIFGGFGLGLLYKVANVSFRGWKDVANFEFGAPLKAGSAGAEVSPELVGVGYIIGPRIAFTMAAGGVLSYLLLIPMIKFFGELLTVPLAPATTLIKDMSPDDIRDAYVLYIGAGAVAAGGLISLVRSLPAIWGGLKGGLAGMGKAQAQGRSSAGKAALRTDQDIPIKWVAIGCLAIIAIITFATPLHMNVLGALLILVFGFLFATVSSRLTGEIGSSSNPISGMAVATLLFTCLIFLVMGWTGGRYYVTALSVGAIVCIAASNAGTTSQDLKTGFLVGSTPRLQQYAILCGAFASALVLGPILLKLNEAGTVYVPAAQVAPAITVDASKLTETERLQGPQAESDDKTYKVWRKLDTVGGPAGKYLVADDGKLAYLVDPGINGHYHQRPDGSEVKKYDAPKAVLMSYIIKGILDQQLPWTLVLFGVMIAVVLEMAGIQALAFSVGVYLPLVSTLPIAVGGAVRWFADRRNNKLPQYDKLNEEERQAAGDRSSGTLLASGYIAGGALAGIVIAITAGVMTNFDNMMAKWAESSNPFVSGPHADLLSLIPYAAIVLLLYWVAREKPQK
Comments
Domain Bacteria
Family Oxalobacteraceae
Species (Full Name) Massilia sp
Gene DEP03_01435
PFAM codes  PF03169
InterPro codes  IPR004813,  IPR004814,  IPR045035
PDB structures (whole Protein) -