| Protein name |
Amino acid permease
|
| Main knot |
41 (78%)
|
| Global pLDDT |
81.98
|
| Species |
Armatimonadetes bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A3D0N8W1
|
| PDB structures |
-
|
| Model length |
299
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
86.4 | 38-280 | 243 | 1-37, 281-299 | 37 | 19 |
|
Model Sequence |
MGRVRRFLVGQPLQTSRLSFERLGLLGGLAIFAADALSSSAYGTEEILRTLVLAGSGALGWAIAIGVAIALLLLVVVTSYRQTVVECPSGGGAYVVVRDNLGTLPSLAAGGALQTDYVLTVAVSVAAGVAAITSAWPVLLEHRVAIGIFLIAFIAVVNLRGVRESAVVFGIPVYAFIGLMFTMIFVGLGRLLFGEMEPVSPAYVAATQPLTLFLILRAFASGGATLTGIEAVANGVQAFTAPSGRNAARVLGILAVPLGAMFIGITLLAHGLEVHPSEHETVAAGGARISVSQHDRATR
|
| Protein name |
Amino acid permease
|
| Main knot |
41 (70%)
|
| Global pLDDT |
84.67
|
| Species |
Armatimonadetes bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
299
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
73.6 | 34-274 | 241 | 1-33, 275-299 | 33 | 25 |
|
Model Sequence |
MGRVRRFLVGQPLQTSRLSFERLGLLGGLAIFAADALSSSAYGTEEILRTLVLAGSGALGWAIAIGVAIALLLLVVVTSYRQTVVECPSGGGAYVVVRDNLGTLPSLAAGGALQTDYVLTVAVSVAAGVAAITSAWPVLLEHRVAIGIFLIAFIAVVNLRGVRESAVVFGIPVYAFIGLMFTMIFVGLGRLLFGEMEPVSPAYVAATQPLTLFLILRAFASGGATLTGIEAVANGVQAFTAPSGRNAARVLGILAVPLGAMFIGITLLAHGLEVHPSEHETVAAGGARISVSQHDRATR
|
A0A3D0N8W1
IPR002293