A0A3D1DKB7 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (48%)
Global pLDDT	84.75
Species	Planctomycetaceae bacterium
UniProt	A0A3D1DKB7
Structure Prediction Model	AlphaFold v4: A0A3D1DKB7
PDB structures	-
Model length	342
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					86.4	24-248	225	1-23, 249-342	23	94

Model Sequence

MIELKNDSLVFSFDQVHPQARLSLDLMRTLRIPDDDTTHLLPPGLGRFPLRHVDDFATSVPDQWVAHGGVMFPMYQSEAMWLSFDSDYLDRRDTSYPFAIKISSGKINAITGDTWTDHLTGDPQDYMVSPTQPWLDGFCVEKDVIRQFVAMPLGSGYTAEEQISGAAEHGGLQILVHPMKRAVFERRFPERDEQQVFYEMSSEMCFAEAEPMEIGLAPGGRMRQEIYEDPFDINDWDTAQASRCFVHIANSLVWRSITGDDPPTTPPTSREYTEAGFPWFDYYSDGETRLEGSRTLRKLKSVATLGQEKSDIPLPENDSIDVEHVVTIREGIGRDQVREGSF

Comments

ESM1

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (56%)
Global pLDDT	67.38
Species	Planctomycetaceae bacterium
UniProt	A0A3D1DKB7
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	342
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					80.5	26-264	239	1-25, 265-342	25	78

Model Sequence

Comments

Domain	Bacteria
Family	Planctomycetaceae
Species (Full Name)	Planctomycetaceae bacterium
Gene	DCE47_07045 DER64_13345
PDB structures (whole Protein)	-

A0A3D1DKB7F1

AF4

Model Sequence

ESM1

Model Sequence