| Protein name |
Membrane protein YkvI
|
| Main knot |
41 (51%)
|
| Global pLDDT |
86.58
|
| Species |
Synergistaceae bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A3D3CKJ7
|
| PDB structures |
-
|
| Model length |
323
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
86.6 | 1-323 | 323 | 0 | 0 |
|
Model Sequence |
MEWRAERKRHGAGEDGRSENGDEREERAVAENETKQEAKKGNFLTFFMEYDWYKKYLMPGFIAQSVLIAGGYGTGRELVEYFVQYGPTGGLMGMGLTTLLWAVFFAISFEFARVFRAYDYRTYFEKLIGKGWILYEIAFLVLLSLIMGVVGAASGSILKDTFGIPPLVGSGIFLIFVAFLTYSGSRAIEVALSWWSYVLYAVYILFLYFGLTQFGDAISANFAAGVVKPGWQMGGFKYAFYNIAVVTTVLFSLREIKTRKEAILSGVIASLICIIPAVLFYVTIIAFYPDVVTMELPANTVIAKMGMPMLLGAWIIVLFGTMI
|
| Protein name |
Membrane protein YkvI
|
| Main knot |
01 (49%)
|
| Species |
Synergistaceae bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
323
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
Model Sequence |
MEWRAERKRHGAGEDGRSENGDEREERAVAENETKQEAKKGNFLTFFMEYDWYKKYLMPGFIAQSVLIAGGYGTGRELVEYFVQYGPTGGLMGMGLTTLLWAVFFAISFEFARVFRAYDYRTYFEKLIGKGWILYEIAFLVLLSLIMGVVGAASGSILKDTFGIPPLVGSGIFLIFVAFLTYSGSRAIEVALSWWSYVLYAVYILFLYFGLTQFGDAISANFAAGVVKPGWQMGGFKYAFYNIAVVTTVLFSLREIKTRKEAILSGVIASLICIIPAVLFYVTIIAFYPDVVTMELPANTVIAKMGMPMLLGAWIIVLFGTMI
|
| Domain |
Bacteria
|
| Family |
Synergistaceae
|
| Species (Full Name) |
Synergistaceae bacterium
|
| Gene |
DIC53_11920
|
| InterPro codes |
 IPR038728
|
| PDB structures (whole Protein) |
-
|
A0A3D3CKJ7