A0A3D4A2K2 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (43%)
Global pLDDT	86.3
Species	Planctomycetaceae bacterium
UniProt	A0A3D4A2K2
Structure Prediction Model	AlphaFold v4: A0A3D4A2K2
PDB structures	-
Model length	344
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					82.8	127-268	142	1-126, 269-344	126	76

Model Sequence

MITLSNDRLSFRFPEIHESAKLDISFLRTLRIPDDGDTYHLPPGLGDFPLQHVDDHLKTVPASWLKHGGVMLPMYQSEAMWLSFDSTRIEDRYASYPFAIKIAAGKIDAVSGKAWTESLDFDDQNYVVSPNQPWLDGFCVKKGIIRQFVAMPLGEGFSVEEQLTDDDEFVGGLQIQVFPMKRAAFDRRFPKDDSFIERRNLKFDSMVCSSPLHSSPDMGLGAGGKMKQDIEKDTFTPEDWDLTTSSRCFVHLANSHTWQAITGSKPPTEPPTAKRYADYGLPWFDYYSDGPAVEGSDALSGIKSVNDIAATKGLTLLNNDPVEVDRVIKLRSPLSKNEVREGSF

Comments

ESM1

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (67%)
Global pLDDT	66.77
Species	Planctomycetaceae bacterium
UniProt	A0A3D4A2K2
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	344
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					83.7	26-269	244	1-25, 270-344	25	75

Model Sequence

Comments

Domain	Bacteria
Family	Planctomycetaceae
Species (Full Name)	Planctomycetaceae bacterium
Gene	DIT88_07185
PDB structures (whole Protein)	-

A0A3D4A2K2F1

AF4

Model Sequence

ESM1

Model Sequence