A0A3D4Y330 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (83%)
Global pLDDT	95.25
Species	Roseburia sp
UniProt	A0A3D4Y330
Structure Prediction Model	AlphaFold v4: A0A3D4Y330
PDB structures	-
Model length	261
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.4	187-228	42	1-186, 229-261	186	33

Model Sequence

MITSSSNQQMKNITALMKKAKERKSQNLFVVEGRKMFEEVPPEWLSKVYVSERFLEEPEAEQLLAGKTYEVVADAVFKSISDTQTPQGILCLVRMPQYPLSDLLRGNRTHLLIVESIQDPGNLGTMLRTGEGAGITGIIMNRTTVDLFNPKTIRSTMGSIYRVPYYIADDLAETIGELKRQKVGIYAAHLKGQMQYDEPSYCKGTAFLIGNEGNGLSDEIAGLADTYVRIPMEGSVESLNAAVSAALLMYETNRQRRRNGK

Comments

ESM1

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (81%)
Global pLDDT	95.74
Species	Roseburia sp
UniProt	A0A3D4Y330
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	261
ESM generation time	2023-06-26: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Parsing response... [0/0]

Loading ...

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					96.2	32-111	80	1-31, 112-261	31	150

Model Sequence

Comments

Domain	Bacteria
Family	Lachnospiraceae
Species (Full Name)	Roseburia sp
Gene	DF667_03590
PFAM codes	PF00588, PF08032
InterPro codes	IPR001537, IPR013123, IPR029026, IPR029028, IPR029064
PDB structures (whole Protein)	-

A0A3D4Y330F1

AF4

Model Sequence

ESM1

Model Sequence