A0A3D6BC15 | AlphaKnot 2.0

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Information

Protein name	DUF4476 domain-containing protein
Main knot	5₁ (89%)
Global pLDDT	86.23
Species	Ignavibacteriales bacterium
UniProt	A0A3D6BC15
Structure Prediction Model	AlphaFold v6: A0A3D6BC15
PDB structures	-
Structure in AlphaLasso	A0A3D6BC15: LS_2++C
Model length	112
AlphaFold deposition date	2026-06-01
AlphaKnot deposition date	2026-07-09

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.94	46-102	57	1-45, 103-112	45	10		Knot
					97.96	57-90	34	1-56, 91-112	56	22		Knot

MKTHLKNIYLIVFIATLNSFVIAQDKSKIDFENCTFNGFLLNGKVKFVESFPDIKVQIVDAFPDLKVKLVNSFPDDCGEWQIVESFPDVKIKIVDSFPDIKIKFVESFPGKP

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Categories voted by users:

Information

Protein name	DUF4476 domain-containing protein
Main knot	5₁ (90%)
Global pLDDT	86.13
Species	Ignavibacteriales bacterium
UniProt	A0A3D6BC15
Structure Prediction Model	AlphaFold v4: A0A3D6BC15
PDB structures	-
Structure in AlphaLasso	A0A3D6BC15: LS_2++C
Model length	112
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					98.0	45-102	58	1-44, 103-112	44	10

MKTHLKNIYLIVFIATLNSFVIAQDKSKIDFENCTFNGFLLNGKVKFVESFPDIKVQIVDAFPDLKVKLVNSFPDDCGEWQIVESFPDVKIKIVDSFPDIKIKFVESFPGKP

Comments

Categories voted by users:

Information

Protein name	DUF4476 domain-containing protein
Main knot	0₁ (94%)
Species	Ignavibacteriales bacterium
UniProt	A0A3D6BC15
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A3D6BC15: LS_2++C
Model length	112
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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MKTHLKNIYLIVFIATLNSFVIAQDKSKIDFENCTFNGFLLNGKVKFVESFPDIKVQIVDAFPDLKVKLVNSFPDDCGEWQIVESFPDVKIKIVDSFPDIKIKFVESFPGKP

Comments

Domain	Bacteria
Family	unclassified Ignavibacteriales
Species (Full Name)	Ignavibacteriales bacterium
Gene	DHV28_09825
PDB structures (whole Protein)	-

A0A3D6BC15F1