| Protein name |
rRNA methylase
|
| Main knot |
31 (72%)
|
| Global pLDDT |
94.7
|
| Species |
Fructobacillus pseudoficulneus
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A3F3H9Z4
|
| PDB structures |
-
|
| Model length |
257
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
93.2 | 187-229 | 43 | 1-186, 230-257 | 186 | 28 |
|
Model Sequence |
MERILSKQNAKVKAWAKLATKKGRQEQKTYLLDGWHLVEEAIKANAKFHAIMATEEQMEAHLPDVPHGVPAFEISKEVAAHIAGSKTPQGIFAEVTLPEKTFDPAYVHDGLWLFLDAIQDPGNVGTLIRTADAAGFKGVVLGQDTADAYAPKVVRAMQGSHFHLEVLQGDLNDWIDAFEQNDLPVYGSELNEAAKPYQDIHGLSAGALIVGNEGQGLNPDLAAKTTANLYIPILGSAESLNVAVAGGILMFRLSLGN
|
| Protein name |
rRNA methylase
|
| Main knot |
31 (71%)
|
| Global pLDDT |
95.41
|
| Species |
Fructobacillus pseudoficulneus
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
257
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
96.3 | 32-232 | 201 | 1-31, 233-257 | 31 | 25 |
|
Model Sequence |
MERILSKQNAKVKAWAKLATKKGRQEQKTYLLDGWHLVEEAIKANAKFHAIMATEEQMEAHLPDVPHGVPAFEISKEVAAHIAGSKTPQGIFAEVTLPEKTFDPAYVHDGLWLFLDAIQDPGNVGTLIRTADAAGFKGVVLGQDTADAYAPKVVRAMQGSHFHLEVLQGDLNDWIDAFEQNDLPVYGSELNEAAKPYQDIHGLSAGALIVGNEGQGLNPDLAAKTTANLYIPILGSAESLNVAVAGGILMFRLSLGN
|
A0A3F3H9Z4
IPR001537