| Protein name |
TraB/GumN family protein
|
| Main knot |
52 (43%)
|
| Global pLDDT |
84.08
|
| Species |
Pigmentiphaga sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A3G8GGI2
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 A0A3G8GGI2: L-1N
|
| Model length |
323
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
84.0 | 13-300 | 288 | 1-12, 301-323 | 12 | 23 |
|
Model Sequence |
MPGLWSALRSLLLALACAAGVPAFASAPPGATPREDEPPVEAWRQWRSVLFRVQAPGATPAAPDGAAAESVNFIFGTIHFGDPGELALDTGVMREAMSHTRILVNEVANDAHWDASKERYRLLADQAGLPGLIGQQAYAELQRLLPAVPPALLHRLKPWAALALLEARGEVAGEQTLDRRLERWAADMQLRTEHLETLDEQLAALDCVPSAEQALVLKQRLQSPWLFSEQSARVLEYYRSRNLAAWLDEIDAMVGLDARARPIEDRARRCLIEARNERWLPRLDELLRRGGMFVAVGAIHLTGAAGLLERLRQRGFLIVAEPL
|
| Protein name |
TraB/GumN family protein
|
| Main knot |
52 (34%)
|
| Global pLDDT |
84.47
|
| Species |
Pigmentiphaga sp
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Structure in AlphaLasso |
A0A3G8GGI2: L-1N
|
| Model length |
323
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
66.5 | 11-251 | 241 | 1-10, 252-323 | 10 | 72 |
|
Model Sequence |
MPGLWSALRSLLLALACAAGVPAFASAPPGATPREDEPPVEAWRQWRSVLFRVQAPGATPAAPDGAAAESVNFIFGTIHFGDPGELALDTGVMREAMSHTRILVNEVANDAHWDASKERYRLLADQAGLPGLIGQQAYAELQRLLPAVPPALLHRLKPWAALALLEARGEVAGEQTLDRRLERWAADMQLRTEHLETLDEQLAALDCVPSAEQALVLKQRLQSPWLFSEQSARVLEYYRSRNLAAWLDEIDAMVGLDARARPIEDRARRCLIEARNERWLPRLDELLRRGGMFVAVGAIHLTGAAGLLERLRQRGFLIVAEPL
|
A0A3G8GGI2
IPR002816