A0A3M0YFJ9 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Transporter
Main knot	4₁ (51%)
Global pLDDT	92.61
Species	Gammaproteobacteria bacterium
UniProt	A0A3M0YFJ9
Structure Prediction Model	AlphaFold v4: A0A3M0YFJ9
PDB structures	-
Model length	296
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.2	25-275	251	1-24, 276-296	24	21

Model Sequence

MRRQSIHGQWSSRFAFILAATGSAVGLGNIWKFPYITGENGGGAFVLVYLLCILAIGLPIMMAEVMLGRRGRQNPINTMRTLAEESGASPWWRLLGWMGVLAGFLILSYYSVIAGWALAYIFRSAGGLFEGATAAMVQSIFAHLVQDPEKLLAWHTIFMGMTMMVVARGVRSGLEKAVRYMMPALFILLLVLVGYALNTGAFREGLDFLFTPRFERLSAPGVLIAMGHAFFTLSLGMGAIMIYGSYLPERASIARVSMAVVFSDTAVALLAGLAIFPLVFAHGLEPGSGPGLIFQT

Comments

ESM1

Categories voted by users:

Information

Protein name	Transporter
Main knot	4₁ (53%)
Global pLDDT	91.95
Species	Gammaproteobacteria bacterium
UniProt	A0A3M0YFJ9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	296
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.1	23-275	253	1-22, 276-296	22	21

Model Sequence

Comments

Domain	Bacteria
Family	unclassified Gammaproteobacteria
Species (Full Name)	Gammaproteobacteria bacterium
Gene	D6819_05055
PFAM codes	PF00209
InterPro codes	IPR000175, IPR037272
PDB structures (whole Protein)	-

A0A3M0YFJ9F1

AF4

Model Sequence

ESM1

Model Sequence