A0A3M1D4Y1 | AlphaKnot 2.0

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Information

Protein name	DUF3718 domain-containing protein
Main knot	5₁ (90%)
Global pLDDT	89.32
Species	Deltaproteobacteria bacterium
UniProt	A0A3M1D4Y1
Structure Prediction Model	AlphaFold v6: A0A3M1D4Y1
PDB structures	-
Structure in AlphaLasso	A0A3M1D4Y1: LS_2++C
Model length	102
AlphaFold deposition date	2026-06-01
AlphaKnot deposition date	2026-07-09

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.38	35-92	58	1-34, 93-102	34	10		Knot
					97.37	47-80	34	1-46, 81-102	46	22		Knot

MVSLTLLLSLMAGQALAGKVGADCTFKGKKLYGKVKFVENFPDIKVQIVDSFPDLKVKIVDSFPDKCGKWKVVENFPDLKVKIVNSFPDIKIKYVSSFPGLP

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Categories voted by users:

Information

Protein name	DUF3718 domain-containing protein
Main knot	5₁ (89%)
Global pLDDT	90.35
Species	Deltaproteobacteria bacterium
UniProt	A0A3M1D4Y1
Structure Prediction Model	AlphaFold v4: A0A3M1D4Y1
PDB structures	-
Structure in AlphaLasso	A0A3M1D4Y1: LS_2++C
Model length	102
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.4	35-92	58	1-34, 93-102	34	10

MVSLTLLLSLMAGQALAGKVGADCTFKGKKLYGKVKFVENFPDIKVQIVDSFPDLKVKIVDSFPDKCGKWKVVENFPDLKVKIVNSFPDIKIKYVSSFPGLP

Comments

Categories voted by users:

Information

Protein name	DUF3718 domain-containing protein
Main knot	0₁ (92%)
Species	Deltaproteobacteria bacterium
UniProt	A0A3M1D4Y1
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A3M1D4Y1: LS_2++C
Model length	102
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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MVSLTLLLSLMAGQALAGKVGADCTFKGKKLYGKVKFVENFPDIKVQIVDSFPDLKVKIVDSFPDKCGKWKVVENFPDLKVKIVNSFPDIKIKYVSSFPGLP

Comments

Domain	Bacteria
Family	unclassified Deltaproteobacteria
Species (Full Name)	Deltaproteobacteria bacterium
Gene	D6806_04290
PDB structures (whole Protein)	-

A0A3M1D4Y1F1