A0A3M1MQS1F1

Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
AF4
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
Main knot
31 (96%)
Global pLDDT
87.17
Species
Deltaproteobacteria bacterium
UniProt
Structure Prediction Model
AlphaFold v4:  A0A3M1MQS1
PDB structures
-
Model length
270
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
94.7 173-220 48 1-172, 221-270 172 50
Model Sequence
MGQPCLSPDLTMRRFFLDPNLLTEDQVDLPGETLKHLRVLRLSVGDRIELLDGSGQVATARIEILNRQNAQVRIVNRRQEKELALPVTLLQGLPKADKFDLILQKGTELGIRRFVPVLTQRCQPDGGKRRLDRWQRIAREAARQSGRFRLPELEEPVPLAQALAREEGDLKLVAWEQAITPLNQGLANRQPQGVVLLVGPEGGFAPEEVALAQRFDYLPISLGPRILRTETAGFVLAGILQYVYGDLNRPAGGIEPAQTCPEQGGRRDGP
Comments
ESM1
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
Main knot
31 (94%)
Global pLDDT
91.74
Species
Deltaproteobacteria bacterium
UniProt
Structure Prediction Model
PDB structures
-
Model length
270
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
94.5 171-220 50 1-170, 221-270 170 50
Model Sequence
MGQPCLSPDLTMRRFFLDPNLLTEDQVDLPGETLKHLRVLRLSVGDRIELLDGSGQVATARIEILNRQNAQVRIVNRRQEKELALPVTLLQGLPKADKFDLILQKGTELGIRRFVPVLTQRCQPDGGKRRLDRWQRIAREAARQSGRFRLPELEEPVPLAQALAREEGDLKLVAWEQAITPLNQGLANRQPQGVVLLVGPEGGFAPEEVALAQRFDYLPISLGPRILRTETAGFVLAGILQYVYGDLNRPAGGIEPAQTCPEQGGRRDGP
Comments
Domain Bacteria
Family unclassified Deltaproteobacteria
Species (Full Name) Deltaproteobacteria bacterium
Gene D6751_07020
PFAM codes  PF04452
InterPro codes  IPR006700,  IPR015947,  IPR029026,  IPR029028,  IPR046886,  IPR046887
PDB structures (whole Protein) -
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