| Protein name |
YD repeat protein
|
| Main knot |
52 (53%)
|
| Global pLDDT |
83.05
|
| Species |
Pseudomonas viridiflava
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A3M4P5M9
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 A0A3M4P5M9: LL-1,-1
|
| Model length |
920
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
76.6 | 2-608 | 607 | 1-1, 609-920 | 1 | 312 |
|
Model Sequence |
MFEAARLLDEIEHTGAMAGFVLGAIVGIAAVAYVSLTFATCGFGGFLLAMAVGLAGNAIASIGESIGSAFSSPAGQIESASPNVFINGRPAAFAIESTAVCDKHSPIVKVAEGSSNVFINGQPAARKGDKLTCGAKIGTGSPNVFIGGGTQRYLPVDDEVSAMARYTVDILLVVAGGAKAVLSIAKLGMQAGLKAAGPCALQFMGGVFLGDAIFRFGVAPVAEKVLGGLHGNPVDTTTGRKLLIDESDFSLPGLMPIEWTRFYASDLDVDSALGKGWVLPWEQSLRRKGSFLYLSDNQGRSVPFVTLDYNQRIYNAQEQLYLVRTEGGHYLLQTLDNVFYYFGEVPDDNQPVPLQRVENALGHFLHFVRSEDGVLTDICATGGQRVHLHYDEVTSRLSTVKRIVDDKAVETLVRYGYDSNGQLNSVYNRNGGAVRNFNYTDGLMTRHANALGLSCEYRWETIDDKPRVVEHWTSDGEHFQFDYDFEARQTRVTDVLDRRAEVTWNKDRRVVASTDFGGEQYLIALDDTGNINGLTLPDGNQLGFEYDDLSRLTAETDPLGRTTRYQHHYKTTLVKQITYPDGSTWKARYDERGNLVAEIDALGHKTEYLNGEDGLPHTIVDPTLKSKYLWWNNLAQVERFQDCSGKSTYYRYDERHQLVAVTDALNNTTTLERKPGGEVLRIEHPDGTRESFTYNAHGQVLTHTDGKDQTTHLARNARGLPTRRQDPKGLMVAYQYDRALRLVALSNENDATYTFAYDHSDRLIEEKRIDQLTRRFSYNLGGHLTQVEETGYSEKGERPQRSTYFERDPIGRLLARLNDDARQDFTYDDSDRLLSIQRTPTDGGRKIGVTAEKLEFAYDILGRLTQESSPQGTLAYEYDPLSNLTTLTLPTGQHLNHLYYGSGHLHQLNLDGQLISDMER
|
A0A3M4P5M9
IPR006530