A0A3N5GQT7 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Sodium-dependent transporter
Main knot	4₁ (71%)
Global pLDDT	91.81
Species	Burkholderiales bacterium
UniProt	A0A3N5GQT7
Structure Prediction Model	AlphaFold v4: A0A3N5GQT7
PDB structures	-
Model length	303
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					93.6	23-273	251	1-22, 274-303	22	30

Model Sequence

MTAQPEKWSGRIGFILATIGSAVGIGSIWKFPYEVGANGGSAFVLFYVVGLVLVVVPLMLAEFAIGRRGRADPSGSIAAVAQAAGANRRWAAAGLLGVLTGYLILSFYSVIGGWTIGYAVETALYGLPGADPQAVNARYEAFLASPWRMLAWHAVFMATATVVVARGVEKGIEIASKVLMPLLVALLLVLAGYSMIEGDLPATLRFLLKLDPQHLTARTALEALGLGFFSIGVGLGMMITYAAYSGAEIGLRQVAVVAVVADTFISLLAGLAVFPIVFAHGLDPASGPGLVFVTLPLAFAKMP

Comments

ESM1

Categories voted by users:

Information

Protein name	Sodium-dependent transporter
Main knot	4₁ (70%)
Global pLDDT	93.64
Species	Burkholderiales bacterium
UniProt	A0A3N5GQT7
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	303
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					93.4	23-273	251	1-22, 274-303	22	30

Model Sequence

Comments

Domain	Bacteria
Family	unclassified Burkholderiales
Species (Full Name)	Burkholderiales bacterium
Gene	EHM83_17860
PFAM codes	PF00209
InterPro codes	IPR000175, IPR037272
PDB structures (whole Protein)	-

A0A3N5GQT7F1

AF4

Model Sequence

ESM1

Model Sequence