A0A3N5JJ39F1

TraB/GumN family protein
AF6
Categories voted by users:
Information
Protein name
TraB/GumN family protein
Main knot
62 (82%)
Global pLDDT
80.42
Species
Xanthomonadales bacterium
UniProt
Structure Prediction Model
AlphaFold v6:  A0A3N5JJ39
PDB structures
-
Model length
338
AlphaFold deposition date
2026-06-01
AlphaKnot deposition date
2026-07-09
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
84.66 13-316 304 1-12, 317-338 12 22 Knot
81.89 25-177 153 1-24, 178-338 24 161 Knot
Model Sequence
MQIAMKPRAAAALLAAFVLVSAWWGPTWAGGASELTGAPPAQPETLSAKGDSSLFWALARDGEPVGYLLGTIHSEDPRVLDFAEAFSEQLSANQTFAMEMVPDLPTLTRLTEYMQYQDGTTLEARIGAERFARLQTALSDYRVPADWIARMKVWAAMMTLSVPPPQTGFFMDFSLSLRAAGAGLEVVGLETLEQQLSFLEAMPMKQQLALLDQALDEYDRVEAVHTQMVDSYLAGDLQTLVSQTEEQLRELDPEARSYFMEQGIDARNRRMLQALLPLLEAGPVFVAVGALHLAGASGLIAGLRSAGYELIPLPLPLSAPESRGQTEQGADDKAGDAP
Comments
AF4
Categories voted by users:
Information
Protein name
TraB/GumN family protein
Main knot
62 (82%)
Global pLDDT
81.2
Species
Xanthomonadales bacterium
UniProt
Structure Prediction Model
AlphaFold v4:  A0A3N5JJ39
PDB structures
-
Model length
338
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
85.5 19-314 296 1-18, 315-338 18 24
Model Sequence
MQIAMKPRAAAALLAAFVLVSAWWGPTWAGGASELTGAPPAQPETLSAKGDSSLFWALARDGEPVGYLLGTIHSEDPRVLDFAEAFSEQLSANQTFAMEMVPDLPTLTRLTEYMQYQDGTTLEARIGAERFARLQTALSDYRVPADWIARMKVWAAMMTLSVPPPQTGFFMDFSLSLRAAGAGLEVVGLETLEQQLSFLEAMPMKQQLALLDQALDEYDRVEAVHTQMVDSYLAGDLQTLVSQTEEQLRELDPEARSYFMEQGIDARNRRMLQALLPLLEAGPVFVAVGALHLAGASGLIAGLRSAGYELIPLPLPLSAPESRGQTEQGADDKAGDAP
Comments
ESM1
Categories voted by users:
Information
Protein name
TraB/GumN family protein
Main knot
62 (84%)
Global pLDDT
84.78
Species
Xanthomonadales bacterium
UniProt
Structure Prediction Model
PDB structures
-
Model length
338
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
54.5 15-317 303 1-14, 318-338 14 21
Model Sequence
MQIAMKPRAAAALLAAFVLVSAWWGPTWAGGASELTGAPPAQPETLSAKGDSSLFWALARDGEPVGYLLGTIHSEDPRVLDFAEAFSEQLSANQTFAMEMVPDLPTLTRLTEYMQYQDGTTLEARIGAERFARLQTALSDYRVPADWIARMKVWAAMMTLSVPPPQTGFFMDFSLSLRAAGAGLEVVGLETLEQQLSFLEAMPMKQQLALLDQALDEYDRVEAVHTQMVDSYLAGDLQTLVSQTEEQLRELDPEARSYFMEQGIDARNRRMLQALLPLLEAGPVFVAVGALHLAGASGLIAGLRSAGYELIPLPLPLSAPESRGQTEQGADDKAGDAP
Comments
Domain Bacteria
Family unclassified Xanthomonadales
Species (Full Name) Xanthomonadales bacterium
Gene EHM68_01365
PFAM codes  PF01963
InterPro codes  IPR002816
PDB structures (whole Protein) -
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